RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PGBD1Q96JS3 809 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 RAI14Q9P0K7 980 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
LDB3-204ENST00000372066 TCP10L2B9ZVM9 353 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 YEATS4O95619 227 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 CRKP46108 304 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 NT5C2P49902 561 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
LDB3-204ENST00000372066 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 DACT1Q9NYF0 836 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
LDB3-204ENST00000372066 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 PPP2R5BQ15173 497 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 NFXL1Q6ZNB6 911 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 OTOP1Q7RTM1 612 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 WASF1Q92558 559 aa16.3■□□□□ 0.2
LDB3-204ENST00000372066 ERICH2A1L162 156 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
LDB3-204ENST00000372066 MSNP26038 577 aaKnown RBP16.29■□□□□ 0.2
LDB3-204ENST00000372066 TNNI2P48788 182 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 CRHR2Q13324 411 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 PRPF38BQ5VTL8 546 aaKnown RBP16.29■□□□□ 0.2
LDB3-204ENST00000372066 CCDC73Q6ZRK6 1079 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 OPTNQ96CV9 577 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 PTPN18Q99952 460 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 TMEM39BQ9GZU3 492 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 ABCF2Q9UG63 623 aa16.29■□□□□ 0.2
LDB3-204ENST00000372066 MYH2Q9UKX2 1941 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 TESPA1A2RU30 521 aaPredicted RBP16.28■□□□□ 0.2
LDB3-204ENST00000372066 KDM4AO75164 1064 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 CTDSPL2Q05D32 466 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 PPARAQ07869 468 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 GRIK5Q16478 980 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 CDAN1Q8IWY9 1227 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 FAM200AQ8TCP9 573 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 ERO1AQ96HE7 468 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 TEPSINQ96N21 525 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 RIOK1Q9BRS2 568 aaKnown RBP16.28■□□□□ 0.2
LDB3-204ENST00000372066 ZSWIM5Q9P217 1185 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 NOL7Q9UMY1 257 aaKnown RBP16.28■□□□□ 0.2
LDB3-204ENST00000372066 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
LDB3-204ENST00000372066 MAP3K9P80192 1104 aa16.27■□□□□ 0.2
LDB3-204ENST00000372066 TYRO3Q06418 890 aa16.27■□□□□ 0.2
LDB3-204ENST00000372066 WTAPQ15007 396 aa16.27■□□□□ 0.2
LDB3-204ENST00000372066 SPTY2D1Q68D10 685 aaPredicted RBP16.27■□□□□ 0.2
LDB3-204ENST00000372066 CD99L2Q8TCZ2 262 aa16.27■□□□□ 0.2
LDB3-204ENST00000372066 TBC1D22AQ8WUA7 517 aa16.27■□□□□ 0.2
LDB3-204ENST00000372066 ESR2Q92731 530 aa16.27■□□□□ 0.2
LDB3-204ENST00000372066 PDE4DIPQ5VU43 2346 aa16.27■□□□□ 0.19
LDB3-204ENST00000372066 PRKAB2O43741 272 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 IFNAR1P17181 557 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 FOSBP53539 338 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 TRIM29Q14134 588 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.26■□□□□ 0.19
LDB3-204ENST00000372066 MIGA1Q8NAN2 632 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 ALG1Q9BT22 464 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 TNRC18O15417 2968 aaPredicted RBP16.26■□□□□ 0.19
LDB3-204ENST00000372066 NR1I2O75469 434 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 HDLBPQ00341 1268 aaKnown RBP16.26■□□□□ 0.19
LDB3-204ENST00000372066 GUCY1B3Q02153 619 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 SP3Q02447 781 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 NTRK3Q16288 839 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 TPRNQ4KMQ1 711 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 MICU3Q86XE3 530 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 CCAR1Q8IX12 1150 aaKnown RBP16.26■□□□□ 0.19
LDB3-204ENST00000372066 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 TEKT1Q969V4 418 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 MS4A4AQ96JQ5 239 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 EFCC1Q9HA90 598 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 PTPN22Q9Y2R2 807 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 CSADQ9Y600 493 aa16.26■□□□□ 0.19
LDB3-204ENST00000372066 FMNL1O95466 1100 aaPredicted RBP16.25■□□□□ 0.19
LDB3-204ENST00000372066 ME1P48163 572 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 CACNB3P54284 484 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 SSRP1Q08945 709 aaKnown RBP16.25■□□□□ 0.19
LDB3-204ENST00000372066 VGLL4Q14135 290 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 STK38Q15208 465 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 TRIM22Q8IYM9 498 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
LDB3-204ENST00000372066 UBAC1Q9BSL1 405 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 ZKSCAN5Q9Y2L8 839 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 MRVI1Q9Y6F6 885 aa16.25■□□□□ 0.19
LDB3-204ENST00000372066 CCL15-CCL14A0A0B4J2E2 113 aa16.24■□□□□ 0.19
LDB3-204ENST00000372066 KINO60870 393 aaKnown RBP16.24■□□□□ 0.19
LDB3-204ENST00000372066 FGRP09769 529 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms