RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
PTPN1-201ENST00000371621 CYP21A2P08686 494 aa13.07□□□□□ -0.32
PTPN1-201ENST00000371621 TMOD1P28289 359 aa13.07□□□□□ -0.32
PTPN1-201ENST00000371621 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
PTPN1-201ENST00000371621 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
PTPN1-201ENST00000371621 ZCWPW1Q9H0M4 648 aa13.07□□□□□ -0.32
PTPN1-201ENST00000371621 A0A1W2PQ27 194 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 A0A1W2PQ64 194 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 A0A1W2PQD8 194 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 CHL1O00533 1208 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 STAT6P42226 847 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 SLCO1A2P46721 670 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 TIMM10P62072 90 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 TOB2Q14106 344 aaPredicted RBP13.06□□□□□ -0.32
PTPN1-201ENST00000371621 NAA35Q5VZE5 725 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 DAAM2Q86T65 1068 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
PTPN1-201ENST00000371621 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
PTPN1-201ENST00000371621 SMARCAL1Q9NZC9 954 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
PTPN1-201ENST00000371621 PHF20L1A8MW92 1017 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 NDUFA10O95299 355 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 NBPF6Q5VWK0 638 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 RSRC2Q7L4I2 434 aaKnown RBP13.06□□□□□ -0.32
PTPN1-201ENST00000371621 NBPF5PQ86XG9 351 aaPredicted RBP13.06□□□□□ -0.32
PTPN1-201ENST00000371621 NBPF4Q96M43 638 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN1-201ENST00000371621 NLRC4Q9NPP4 1024 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 GMNCA6NCL1 334 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 COG7P83436 770 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 TRAF1Q13077 416 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 LAMB3Q13751 1172 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 MORC4Q8TE76 937 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 LRRC1Q9BTT6 524 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 NOC4LQ9BVI4 516 aaKnown RBP13.06□□□□□ -0.32
PTPN1-201ENST00000371621 NAPBQ9H115 298 aa13.06□□□□□ -0.32
PTPN1-201ENST00000371621 OPHN1O60890 802 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 HNRNPLLQ8WVV9 542 aaKnown RBP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 EIF2AK4Q9P2K8 1649 aaKnown RBP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 EHHADHQ08426 723 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 IQUBQ8NA54 791 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 RRP36Q96EU6 259 aaKnown RBP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 STAMBPL1Q96FJ0 436 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 RNPC3Q96LT9 517 aaKnown RBP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 ETAA1Q9NY74 926 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 TAF6LQ9Y6J9 622 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 RGS16O15492 202 aaPredicted RBP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 IGHMBP2P38935 993 aaKnown RBP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 NLRP5P59047 1200 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 PAK1Q13153 545 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 TC2NQ8N9U0 490 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 LMBR1Q8WVP7 490 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
PTPN1-201ENST00000371621 INTS9Q9NV88 658 aaKnown RBP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
PTPN1-201ENST00000371621 PDIA3P30101 505 aaKnown RBP13.04□□□□□ -0.32
PTPN1-201ENST00000371621 NBPF9Q3BBW0 867 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 SLC9C2Q5TAH2 1124 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 FAM114A1Q8IWE2 563 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 NOX5Q96PH1 765 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 TMEM165Q9HC07 324 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 RHBDL2Q9NX52 303 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 PLAAQ9Y263 795 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 A0A087WZG4 1122 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
PTPN1-201ENST00000371621 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
PTPN1-201ENST00000371621 BTBD18B2RXH4 712 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 KCNK3O14649 394 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 CREB3O43889 395 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 ANP32DO95626 131 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 MCM7P33993 719 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 TFCP2Q12800 502 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 KIF2BQ8N4N8 673 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 PI4K2BQ8TCG2 481 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 NOD2Q9HC29 1040 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 MLXIPLQ9NP71 852 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 TLR7Q9NYK1 1049 aaKnown RBP13.04□□□□□ -0.32
PTPN1-201ENST00000371621 INTUQ9ULD6 942 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 AOX1Q06278 1338 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 KCNJ18B7U540 433 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 E7EWF7 191 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 MAP2K7O14733 419 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 GNAT1P11488 350 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 KCNJ12Q14500 433 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 NELFBQ8WX92 580 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 CHP1Q99653 195 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 EPN3Q9H201 632 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 AATFQ9NY61 560 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTPN1-201ENST00000371621 MAN1B1Q9UKM7 699 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 ATP8A1Q9Y2Q0 1164 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 KDM5DQ9BY66 1539 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 A0A0U1RQJ8 604 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms