RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 CREB3L3Q68CJ9 461 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 HSCBQ8IWL3 235 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 PNMA1Q8ND90 353 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 SH3TC2Q8TF17 1288 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 GPR108Q9NPR9 543 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 ATP8A2Q9NTI2 1148 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
USP1-202ENST00000371146 GNAT2P19087 354 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 HOXA13P31271 388 aaPredicted RBP8.15□□□□□ -1.1
USP1-202ENST00000371146 ERO1BQ86YB8 467 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 GPATCH11Q8N954 259 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 CCDC43Q96MW1 224 aaKnown RBP8.15□□□□□ -1.1
USP1-202ENST00000371146 ZFYVE28Q9HCC9 887 aa8.15□□□□□ -1.1
USP1-202ENST00000371146 TNKSO95271 1327 aa8.15□□□□□ -1.11
USP1-202ENST00000371146 EGFL6Q8IUX8 553 aa8.15□□□□□ -1.11
USP1-202ENST00000371146 DPF3Q92784 378 aa8.15□□□□□ -1.11
USP1-202ENST00000371146 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.11
USP1-202ENST00000371146 ATG4CQ96DT6 458 aa8.15□□□□□ -1.11
USP1-202ENST00000371146 PRDM5Q9NQX1 630 aaPredicted RBP8.15□□□□□ -1.11
USP1-202ENST00000371146 ZSWIM5Q9P217 1185 aa8.15□□□□□ -1.11
USP1-202ENST00000371146 CCPG1Q9ULG6 757 aa8.15□□□□□ -1.11
USP1-202ENST00000371146 V9GY48 417 aaPredicted RBP8.15□□□□□ -1.11
USP1-202ENST00000371146 N4BP2Q86UW6 1770 aaPredicted RBP8.14□□□□□ -1.11
USP1-202ENST00000371146 ZBED4O75132 1171 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 CYP21A2P08686 494 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 OSBPP22059 807 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 MCM5P33992 734 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 KCTD2Q14681 263 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 ADCK5Q3MIX3 580 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 DNTTIP2Q5QJE6 756 aaKnown RBP8.14□□□□□ -1.11
USP1-202ENST00000371146 ZMYM1Q5SVZ6 1142 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 SNRNP48Q6IEG0 339 aaKnown RBP8.14□□□□□ -1.11
USP1-202ENST00000371146 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.14□□□□□ -1.11
USP1-202ENST00000371146 EP400NLQ6ZTU2 488 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 COA7Q96BR5 231 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 ARPP21Q9UBL0 812 aaPredicted RBP8.14□□□□□ -1.11
USP1-202ENST00000371146 RGPD1P0DJD0 1748 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 SCN11AQ9UI33 1791 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 LRP5O75197 1615 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 PARP1P09874 1014 aaKnown RBP8.14□□□□□ -1.11
USP1-202ENST00000371146 ADD1P35611 737 aaKnown RBP8.14□□□□□ -1.11
USP1-202ENST00000371146 JAKMIP3Q5VZ66 844 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 ZNF384Q8TF68 577 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 SCLT1Q96NL6 688 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 P2RX7Q99572 595 aaKnown RBP8.14□□□□□ -1.11
USP1-202ENST00000371146 TMEM106CQ9BVX2 250 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 RNF208Q9H0X6 261 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 ZHX3Q9H4I2 956 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 NOD1Q9Y239 953 aa8.14□□□□□ -1.11
USP1-202ENST00000371146 TESPA1A2RU30 521 aaPredicted RBP8.13□□□□□ -1.11
USP1-202ENST00000371146 ST18O60284 1047 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 CAP2P40123 477 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 PRAMEF19Q5SWL8 479 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 SEPT14Q6ZU15 432 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 TBC1D10CQ8IV04 446 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 CKAP2LQ8IYA6 745 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 RASEFQ8IZ41 740 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 SMARCC2Q8TAQ2 1214 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 RBM46Q8TBY0 533 aaKnown RBP8.13□□□□□ -1.11
USP1-202ENST00000371146 KANSL2Q9H9L4 492 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 FAM205AQ6ZU69 1335 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 E7EWF7 191 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 ZBTB43O43298 467 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 PSMA5P28066 241 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 METAP2P50579 478 aaKnown RBP eCLIP8.13□□□□□ -1.11
USP1-202ENST00000371146 RHBDL3P58872 404 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 NLRP5P59047 1200 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 SLC9C1Q4G0N8 1177 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 TREML2Q5T2D2 321 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 SCYL3Q8IZE3 742 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 ZC3H15Q8WU90 426 aaKnown RBP8.13□□□□□ -1.11
USP1-202ENST00000371146 PPP1R16BQ96T49 567 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 PANK2Q9BZ23 570 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 EPB41L4AQ9HCS5 686 aaPredicted RBP8.13□□□□□ -1.11
USP1-202ENST00000371146 NHSQ6T4R5 1651 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 KLRF2D3W0D1 207 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 CHMP2AO43633 222 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 ITGBL1O95965 494 aaPredicted RBP8.13□□□□□ -1.11
USP1-202ENST00000371146 CETPP11597 493 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 NAPAP54920 295 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 KLRG1Q96E93 195 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 SH2D4AQ9H788 454 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 HELLSQ9NRZ9 838 aa8.13□□□□□ -1.11
USP1-202ENST00000371146 BMP3P12645 472 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 EIF2AK2P19525 551 aaKnown RBP8.12□□□□□ -1.11
USP1-202ENST00000371146 SREBF2Q12772 1141 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
USP1-202ENST00000371146 KRT23Q9C075 422 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 BTBD19C9JJ37 291 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 SGSM2O43147 1006 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 CALM1P0DP23 149 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 CALM2P0DP24 149 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 CALM3P0DP25 149 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 PTPRAP18433 802 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 MAP2K1Q02750 393 aaPredicted RBP8.12□□□□□ -1.11
USP1-202ENST00000371146 CRHR2Q13324 411 aa8.12□□□□□ -1.11
USP1-202ENST00000371146 L1TD1Q5T7N2 865 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms