RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 TOGARAM2Q6ZUX3 1019 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 EPB41L5Q9HCM4 733 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 ABCC2Q92887 1545 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 ZFYVE9O95405 1425 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 RTL9Q8NET4 1388 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 SPOPO43791 374 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 PDE1CQ14123 709 aaPredicted RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 SV2BQ7L1I2 683 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 MAGEB6Q8N7X4 407 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 MAP4K1Q92918 833 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 EAF2Q96CJ1 260 aaPredicted RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 KRT12Q99456 494 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 ASIC3Q9UHC3 531 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 TRAPPC8Q9Y2L5 1435 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 CXCR5P32302 372 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 PSMD7P51665 324 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 TRAF1Q13077 416 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 LETM2Q2VYF4 491 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 CROCCP2Q86T23 111 aa14.05□□□□□ -0.16
GPC4-201ENST00000370828 RAB3IPQ96QF0 476 aaPredicted RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 SAMSN1Q9NSI8 373 aaKnown RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 CHCHD3Q9NX63 227 aaKnown RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.05□□□□□ -0.16
GPC4-201ENST00000370828 GPAA1O43292 621 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 RBM5P52756 815 aaKnown RBP eCLIP14.04□□□□□ -0.16
GPC4-201ENST00000370828 SLC7A5Q01650 507 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 CCDC62Q6P9F0 684 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
GPC4-201ENST00000370828 HHATQ5VTY9 493 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 MYO1AQ9UBC5 1043 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 RNF8O76064 485 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 HEXIM1O94992 359 aaKnown RBP14.04□□□□□ -0.16
GPC4-201ENST00000370828 NR1D1P20393 614 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 FBXW10Q5XX13 1052 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 HELBQ8NG08 1087 aaPredicted RBP14.04□□□□□ -0.16
GPC4-201ENST00000370828 PGBD1Q96JS3 809 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 HOMER3Q9NSC5 361 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 KRIT1O00522 736 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 RESTQ13127 1097 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 CNNM4Q6P4Q7 775 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 YIPF3Q9GZM5 350 aa14.04□□□□□ -0.16
GPC4-201ENST00000370828 ACTR5Q9H9F9 607 aaPredicted RBP14.04□□□□□ -0.16
GPC4-201ENST00000370828 CALM1P0DP23 149 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 CALM2P0DP24 149 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 CALM3P0DP25 149 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 GGCXP38435 758 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 PSMC4P43686 418 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 TAF11Q15544 211 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 VWA3BQ502W6 1294 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 GSPT2Q8IYD1 628 aaKnown RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 SMYD4Q8IYR2 804 aaPredicted RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 KLHL29Q96CT2 875 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 NCKAP5LQ9HCH0 1330 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 OPHN1O60890 802 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 TADA3O75528 432 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 MBD4O95243 580 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 PDIA3P30101 505 aaKnown RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 COPB1P53618 953 aaKnown RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 SFMBT2Q5VUG0 894 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 CCDC174Q6PII3 467 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 TRIML1Q8N9V2 468 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 NSUN7Q8NE18 718 aaKnown RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 PRDM11Q9NQV5 511 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 RASSF2P50749 326 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 ADAT2Q7Z6V5 191 aaKnown RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 CCDC105Q8IYK2 499 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 GRAMD1CQ8IYS0 662 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 LINC00301Q8NCQ3 95 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 CD2APQ9Y5K6 639 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 CTNND1O60716 968 aaKnown RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 PPFIA2O75334 1257 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 GNAQP50148 359 aa14.03□□□□□ -0.16
GPC4-201ENST00000370828 TBC1D1Q86TI0 1168 aaPredicted RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 CCDC84Q86UT8 332 aaPredicted RBP14.03□□□□□ -0.16
GPC4-201ENST00000370828 BTBD18B2RXH4 712 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 TMEM232C9JQI7 657 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 NOL3O60936 208 aaKnown RBP14.02□□□□□ -0.16
GPC4-201ENST00000370828 TSPY3P0CV98 308 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 TSPY8P0CW00 308 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 KRT15P19012 456 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 PPP1R2P41236 205 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 TNNI2P48788 182 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 MIER3Q7Z3K6 550 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 NOSTRINQ8IVI9 506 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 ZCRB1Q8TBF4 217 aaKnown RBP14.02□□□□□ -0.16
GPC4-201ENST00000370828 PLEKHF1Q96S99 279 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 C19orf44Q9H6X5 657 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 VPS54Q9P1Q0 977 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 PAIP2BQ9ULR5 123 aaKnown RBP14.02□□□□□ -0.16
GPC4-201ENST00000370828 KIF21AQ7Z4S6 1674 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 PTPRTO14522 1441 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 EHHADHQ08426 723 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 SLC39A14Q15043 492 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 PHLDB2Q86SQ0 1253 aa14.02□□□□□ -0.16
GPC4-201ENST00000370828 INTS9Q9NV88 658 aaKnown RBP14.02□□□□□ -0.16
GPC4-201ENST00000370828 PPP1R1BQ9UD71 204 aaPredicted RBP14.02□□□□□ -0.16
GPC4-201ENST00000370828 TNFAIP3P21580 790 aa14.02□□□□□ -0.17
GPC4-201ENST00000370828 DNM2P50570 870 aa14.02□□□□□ -0.17
GPC4-201ENST00000370828 RWDD2BP57060 319 aa14.02□□□□□ -0.17
GPC4-201ENST00000370828 ANKRD20A3Q5VUR7 823 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms