RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 TPCN1Q9ULQ1 816 aa10.32□□□□□ -0.76
SFR1-202ENST00000369729 TACC3Q9Y6A5 838 aa10.32□□□□□ -0.76
SFR1-202ENST00000369729 GOLGA8AA7E2F4 631 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 SMIM22K7EJ46 135 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 GH2P01242 217 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 PDIA3P30101 505 aaKnown RBP10.31□□□□□ -0.76
SFR1-202ENST00000369729 HMGN5P82970 282 aaKnown RBP10.31□□□□□ -0.76
SFR1-202ENST00000369729 ATP2B2Q01814 1243 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 STK3Q13188 491 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 CUL4AQ13619 759 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 TTLL12Q14166 644 aaPredicted RBP10.31□□□□□ -0.76
SFR1-202ENST00000369729 SEC23AQ15436 765 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 APOA5Q6Q788 366 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 ARMC9Q7Z3E5 817 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 ZNF654Q8IZM8 581 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 PNMA1Q8ND90 353 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 LZTS2Q9BRK4 669 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 LLPHQ9BRT6 129 aaKnown RBP10.31□□□□□ -0.76
SFR1-202ENST00000369729 DNAJC18Q9H819 358 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 AS3MTQ9HBK9 375 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 SMC3Q9UQE7 1217 aa10.31□□□□□ -0.76
SFR1-202ENST00000369729 UNCXA6NJT0 531 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 FAM196BA6NMK8 535 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 POTECB2RU33 542 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 GDF11O95390 407 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 CD2BP2O95400 341 aaKnown RBP10.3□□□□□ -0.76
SFR1-202ENST00000369729 ME3Q16798 604 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 RTN1Q16799 776 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 MICU3Q86XE3 530 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 NUP133Q8WUM0 1156 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 GTF3C6Q969F1 213 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 WRNIP1Q96S55 665 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 GPBP1L1Q9HC44 474 aaPredicted RBP10.3□□□□□ -0.76
SFR1-202ENST00000369729 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 IL17RBQ9NRM6 502 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 CLIP2Q9UDT6 1046 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 ZBTB21Q9ULJ3 1066 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 CSADQ9Y600 493 aa10.3□□□□□ -0.76
SFR1-202ENST00000369729 SRCAPQ6ZRS2 3230 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 IGKV6D-41A0A0C4DH26 115 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 ADM5C9JUS6 153 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 PDCP20941 246 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
SFR1-202ENST00000369729 CCDC83Q8IWF9 413 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 TRIM22Q8IYM9 498 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 FANCBQ8NB91 859 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 ZNF526Q8TF50 670 aaPredicted RBP10.29□□□□□ -0.76
SFR1-202ENST00000369729 MKL1Q969V6 931 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 CDCA5Q96FF9 252 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 TMEM47Q9BQJ4 181 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
SFR1-202ENST00000369729 RBM27Q9P2N5 1060 aaKnown RBP10.29□□□□□ -0.76
SFR1-202ENST00000369729 ZNF112Q9UJU3 913 aa10.29□□□□□ -0.76
SFR1-202ENST00000369729 POTEB3A0JP26 581 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 PHF20L1A8MW92 1017 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 NMT2O60551 498 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 PARP1P09874 1014 aaKnown RBP10.28□□□□□ -0.76
SFR1-202ENST00000369729 NOVP48745 357 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 USP14P54578 494 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 FKBP1BP68106 108 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 CCT2P78371 535 aaKnown RBP10.28□□□□□ -0.76
SFR1-202ENST00000369729 MAP3K9P80192 1104 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 SEPT2Q15019 361 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 RCSD1Q6JBY9 416 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 POTEBQ6S5H4 581 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 SCYL3Q8IZE3 742 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 FAM184AQ8NB25 1140 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 WASF1Q92558 559 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 KLRG1Q96E93 195 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 GPHNQ9NQX3 736 aaPredicted RBP10.28□□□□□ -0.76
SFR1-202ENST00000369729 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 SCAF8Q9UPN6 1271 aaKnown RBP10.28□□□□□ -0.76
SFR1-202ENST00000369729 MYH8P13535 1937 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 RAD21O60216 631 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 EEF2P13639 858 aaKnown RBP10.28□□□□□ -0.76
SFR1-202ENST00000369729 SCRN1Q12765 414 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 ASPRV1Q53RT3 343 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 NOL9Q5SY16 702 aaKnown RBP10.28□□□□□ -0.76
SFR1-202ENST00000369729 GPATCH4Q5T3I0 446 aaKnown RBP10.28□□□□□ -0.76
SFR1-202ENST00000369729 PRAMEF18Q5VWM3 479 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 ANKRD13AQ8IZ07 590 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 C2orf69Q8N8R5 385 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 NECAB1Q8N987 351 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 DCAF4Q8WV16 495 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 FEZ1Q99689 392 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.28□□□□□ -0.76
SFR1-202ENST00000369729 GLIS2Q9BZE0 524 aaPredicted RBP10.28□□□□□ -0.76
SFR1-202ENST00000369729 NMRK2Q9NPI5 230 aa10.28□□□□□ -0.76
SFR1-202ENST00000369729 NID2Q14112 1375 aa10.27□□□□□ -0.77
SFR1-202ENST00000369729 XBP1P17861 261 aa10.27□□□□□ -0.77
SFR1-202ENST00000369729 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
SFR1-202ENST00000369729 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.77
SFR1-202ENST00000369729 SSRP1Q08945 709 aaKnown RBP10.27□□□□□ -0.77
SFR1-202ENST00000369729 TROAPQ12815 778 aa10.27□□□□□ -0.77
SFR1-202ENST00000369729 COL9A3Q14050 684 aaPredicted RBP10.27□□□□□ -0.77
SFR1-202ENST00000369729 MAP1SQ66K74 1059 aaPredicted RBP10.27□□□□□ -0.77
SFR1-202ENST00000369729 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
SFR1-202ENST00000369729 GMCL1P1Q8NEA9 526 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms