RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PRPF6O94906 941 aaKnown RBP13.86□□□□□ -0.19
PHGDH-201ENST00000369407 COPB1P53618 953 aaKnown RBP13.86□□□□□ -0.19
PHGDH-201ENST00000369407 USP14P54578 494 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 PPARDQ03181 441 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 STIM1Q13586 685 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 WTAPQ15007 396 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 CRACR2BQ8N4Y2 399 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-201ENST00000369407 CAGE1Q8TC20 777 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 NCAPGQ9BPX3 1015 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 FOXP1Q9H334 677 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-201ENST00000369407 GNL3LQ9NVN8 582 aaKnown RBP13.86□□□□□ -0.19
PHGDH-201ENST00000369407 DUSP10Q9Y6W6 482 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 TRIM75PA6NK02 468 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 NDUFA10O95299 355 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 TCIRG1Q13488 830 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 MIGA1Q8NAN2 632 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 CTAGE1Q96RT6 745 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 ACBD3Q9H3P7 528 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 KAT14Q9H8E8 782 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 MED4Q9NPJ6 270 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 GDAQ9Y2T3 454 aa13.86□□□□□ -0.19
PHGDH-201ENST00000369407 C2orf54Q08AI8 447 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 CCDC122Q5T0U0 273 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 MFSD6Q6ZSS7 791 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 PPM1EQ8WY54 764 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 WASF1Q92558 559 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 MYH8P13535 1937 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 TTC26A0AVF1 554 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 MATR3P43243 847 aaKnown RBP eCLIP13.85□□□□□ -0.19
PHGDH-201ENST00000369407 PPARAQ07869 468 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 EZH2Q15910 746 aaKnown RBP13.85□□□□□ -0.19
PHGDH-201ENST00000369407 PSMB7Q99436 277 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 KCNJ18B7U540 433 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 PDE2AO00408 941 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-201ENST00000369407 ITGA6P23229 1130 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 TDO2P48775 406 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 KCNJ12Q14500 433 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 TRAPPC11Q7Z392 1133 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-201ENST00000369407 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
PHGDH-201ENST00000369407 CRACR2AQ9BSW2 395 aa13.85□□□□□ -0.19
PHGDH-201ENST00000369407 RGPD5Q99666 1765 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 MACROD2A1Z1Q3 448 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 RCCD1A6NED2 376 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 DEXIO95424 95 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 LIFRP42702 1097 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 WDR93Q6P2C0 686 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 NELFBQ8WX92 580 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 CEP131Q9UPN4 1083 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 SAMM50Q9Y512 469 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 SAR1BQ9Y6B6 198 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 XDHP47989 1333 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 USP54Q70EL1 1684 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 HERVK_113P62684 666 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 CYP27A1Q02318 531 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 FANCBQ8NB91 859 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 HDAC7Q8WUI4 952 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 RRP36Q96EU6 259 aaKnown RBP13.84□□□□□ -0.19
PHGDH-201ENST00000369407 SELENOOQ9BVL4 669 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 CDHR2Q9BYE9 1310 aa13.84□□□□□ -0.19
PHGDH-201ENST00000369407 MINDY4BA8MYZ0 360 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 AGPSO00116 658 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 TCP11X2Q5H9J9 407 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 KIAA1328Q86T90 577 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 SMCR8Q8TEV9 937 aaPredicted RBP13.83□□□□□ -0.19
PHGDH-201ENST00000369407 COG1Q8WTW3 980 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 KAT2BQ92831 832 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 PLIN2Q99541 437 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 MTRQ99707 1265 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 LACRTQ9GZZ8 138 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 SMARCAL1Q9NZC9 954 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 V9GY48 417 aaPredicted RBP13.83□□□□□ -0.19
PHGDH-201ENST00000369407 STK36Q9NRP7 1315 aa13.83□□□□□ -0.19
PHGDH-201ENST00000369407 ZC3H4Q9UPT8 1303 aaKnown RBP13.83□□□□□ -0.19
PHGDH-201ENST00000369407 EXOC5O00471 708 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 KLK7P49862 253 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 TUBB2AQ13885 445 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 TTF1Q15361 905 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-201ENST00000369407 FBXW10Q5XX13 1052 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 SH3RF1Q7Z6J0 888 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 ZNF654Q8IZM8 581 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 JAKMIP2Q96AA8 810 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 TUBB2BQ9BVA1 445 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 JADE2Q9NQC1 790 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 AATFQ9NY61 560 aaKnown RBP eCLIP13.83□□□□□ -0.2
PHGDH-201ENST00000369407 RIPOR2Q9Y4F9 1068 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 TCRBV5S4A2TA0A5A2 114 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 SLC7A5Q01650 507 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 PTGDRQ13258 359 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 TADA2BQ86TJ2 420 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 LCORLQ8N3X6 602 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 CCDC51Q96ER9 411 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 YY1AP1Q9H869 796 aa13.83□□□□□ -0.2
PHGDH-201ENST00000369407 ERICH2A1L162 156 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 PLEKHA8P1O95397 391 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms