RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 NUP160Q12769 1436 aa11.12□□□□□ -0.63
SIM1-202ENST00000369208 C8orf74Q6P047 294 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 NSMCE1Q8WV22 266 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 MMRN2Q9H8L6 949 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 MYO1AQ9UBC5 1043 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 ABCC1P33527 1531 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 TRIM75PA6NK02 468 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 CFAP157Q5JU67 520 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 ZNF772Q68DY9 489 aaPredicted RBP11.11□□□□□ -0.63
SIM1-202ENST00000369208 CSRNP2Q9H175 543 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 ARHGEF9O43307 516 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 MAP3K7O43318 606 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 KRT4P19013 534 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 ALS2CLQ60I27 953 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 CCDC125Q86Z20 511 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 USP21Q9UK80 565 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 PARP2Q9UGN5 583 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 DIXDC1Q155Q3 683 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 UTP11Q9Y3A2 253 aaKnown RBP11.11□□□□□ -0.63
SIM1-202ENST00000369208 LMBR1LQ6UX01 489 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 XAB2Q9HCS7 855 aaKnown RBP11.11□□□□□ -0.63
SIM1-202ENST00000369208 TACC3Q9Y6A5 838 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 DKK3Q9UBP4 350 aa11.11□□□□□ -0.63
SIM1-202ENST00000369208 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
SIM1-202ENST00000369208 AKR1B15C9JRZ8 316 aaPredicted RBP11.1□□□□□ -0.63
SIM1-202ENST00000369208 MBIPQ9NS73 344 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 PRKAG2Q9UGJ0 569 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 EEF2P13639 858 aaKnown RBP11.1□□□□□ -0.63
SIM1-202ENST00000369208 GSTA5Q7RTV2 222 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 RHPN1Q8TCX5 695 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 LZTS2Q9BRK4 669 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 FAM169AQ9Y6X4 670 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 E2F6O75461 281 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 GJB2P29033 226 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 HPDP32754 393 aaPredicted RBP11.1□□□□□ -0.63
SIM1-202ENST00000369208 ELMSAN1Q6PJG2 1045 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 NEK2P51955 445 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 MRPS35P82673 323 aaKnown RBP11.1□□□□□ -0.63
SIM1-202ENST00000369208 ICA1Q05084 483 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 RUBCNQ92622 972 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 CACYBPQ9HB71 228 aaKnown RBP11.1□□□□□ -0.63
SIM1-202ENST00000369208 CD2APQ9Y5K6 639 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 CHGBP05060 677 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 HAUS7Q99871 368 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 BABAM1Q9NWV8 329 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 ZNF449Q6P9G9 518 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 PDE11AQ9HCR9 933 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 KLC4Q9NSK0 619 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 CFAP74Q9C0B2 1584 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 SH3TC1Q8TE82 1336 aa11.1□□□□□ -0.63
SIM1-202ENST00000369208 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 VCAM1P19320 739 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 CYP26C1Q6V0L0 522 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 PARP9Q8IXQ6 854 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 MAGEB6Q8N7X4 407 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 UBLCP1Q8WVY7 318 aaPredicted RBP11.09□□□□□ -0.63
SIM1-202ENST00000369208 APBA3O96018 575 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.09□□□□□ -0.63
SIM1-202ENST00000369208 MFN1Q8IWA4 741 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 CCDC51Q96ER9 411 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 RNF113AO15541 343 aaKnown RBP11.09□□□□□ -0.63
SIM1-202ENST00000369208 DPH6Q7L8W6 267 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 RNF34Q969K3 372 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 CNGB3Q9NQW8 809 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 P4HA1P13674 534 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 DNA2P51530 1060 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 EAPPQ56P03 285 aaPredicted RBP11.09□□□□□ -0.63
SIM1-202ENST00000369208 LRRC43Q8N309 656 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 DTHD1Q6ZMT9 781 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 MPP4Q96JB8 637 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 ATG3Q9NT62 314 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 ADAM21Q9UKJ8 722 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 F13A1P00488 732 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 HIBADHP31937 336 aaKnown RBP11.09□□□□□ -0.63
SIM1-202ENST00000369208 PUM3Q15397 648 aaKnown RBP11.09□□□□□ -0.63
SIM1-202ENST00000369208 ITFG2Q969R8 447 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 ASXL1Q8IXJ9 1541 aa11.09□□□□□ -0.63
SIM1-202ENST00000369208 GSTA2P09210 222 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 KIF11P52732 1056 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 KCNA4P22459 653 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 ETF1P62495 437 aaKnown RBP11.08□□□□□ -0.64
SIM1-202ENST00000369208 CCT6BQ92526 530 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 EPSTI1Q96J88 318 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 NPATQ14207 1427 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 EPB41P11171 864 aaKnown RBP11.08□□□□□ -0.64
SIM1-202ENST00000369208 PHEXP78562 749 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 IFT88Q13099 833 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 TBX22Q9Y458 520 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 MCF2LO15068 1137 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 GCP02774 474 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 YWHAEP62258 255 aaKnown RBP11.08□□□□□ -0.64
SIM1-202ENST00000369208 DCPSQ96C86 337 aaKnown RBP11.08□□□□□ -0.64
SIM1-202ENST00000369208 YIPF3Q9GZM5 350 aa11.08□□□□□ -0.64
SIM1-202ENST00000369208 EIF2S1P05198 315 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms