RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 SNAPC2Q13487 334 aa29.41■■■□□ 2.3
NSMCE4A-201ENST00000369017 GMCL1P1Q8NEA9 526 aa29.41■■■□□ 2.3
NSMCE4A-201ENST00000369017 NKX2-3Q8TAU0 364 aa29.41■■■□□ 2.3
NSMCE4A-201ENST00000369017 BRF1Q92994 677 aa29.41■■■□□ 2.3
NSMCE4A-201ENST00000369017 WNK4Q96J92 1243 aa29.41■■■□□ 2.3
NSMCE4A-201ENST00000369017 TCEANC2Q96MN5 208 aa29.41■■■□□ 2.3
NSMCE4A-201ENST00000369017 TRIM75PA6NK02 468 aa29.4■■■□□ 2.3
NSMCE4A-201ENST00000369017 GTF2A2P52657 109 aa29.4■■■□□ 2.3
NSMCE4A-201ENST00000369017 RCAN1P53805 252 aa29.4■■■□□ 2.3
NSMCE4A-201ENST00000369017 VCPKMTQ9H867 229 aa29.4■■■□□ 2.3
NSMCE4A-201ENST00000369017 KCNH4Q9UQ05 1017 aa29.4■■■□□ 2.3
NSMCE4A-201ENST00000369017 DDAH1O94760 285 aa29.39■■■□□ 2.3
NSMCE4A-201ENST00000369017 ECE1P42892 770 aa29.39■■■□□ 2.3
NSMCE4A-201ENST00000369017 PPP2R5BQ15173 497 aa29.39■■■□□ 2.3
NSMCE4A-201ENST00000369017 DEFB115Q30KQ5 88 aa29.39■■■□□ 2.3
NSMCE4A-201ENST00000369017 SPRYD7Q5W111 196 aa29.39■■■□□ 2.3
NSMCE4A-201ENST00000369017 FASTKD5Q7L8L6 764 aaKnown RBP29.39■■■□□ 2.3
NSMCE4A-201ENST00000369017 SIAH1Q8IUQ4 282 aa29.39■■■□□ 2.3
NSMCE4A-201ENST00000369017 MAP3K14Q99558 947 aa29.39■■■□□ 2.3
NSMCE4A-201ENST00000369017 IRF6O14896 467 aa29.38■■■□□ 2.29
NSMCE4A-201ENST00000369017 RAD21O60216 631 aa29.38■■■□□ 2.29
NSMCE4A-201ENST00000369017 MTMR2Q13614 643 aa29.38■■■□□ 2.29
NSMCE4A-201ENST00000369017 SH3D19Q5HYK7 790 aa29.38■■■□□ 2.29
NSMCE4A-201ENST00000369017 CLEC10AQ8IUN9 316 aa29.38■■■□□ 2.29
NSMCE4A-201ENST00000369017 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.38■■■□□ 2.29
NSMCE4A-201ENST00000369017 PHIPQ8WWQ0 1821 aa29.38■■■□□ 2.29
NSMCE4A-201ENST00000369017 A0A1W2PRG0 241 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 F5H6K3 240 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 CETPP11597 493 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 AK2P54819 239 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 EVCP57679 992 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 KLRC3Q07444 240 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 PAXIP1Q6ZW49 1069 aaPredicted RBP29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 ZNF654Q8IZM8 581 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 LRRC47Q8N1G4 583 aaKnown RBP29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 PROCA1Q8NCQ7 364 aaPredicted RBP29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 ACER1Q8TDN7 264 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 DCAF4Q8WV16 495 aa29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 ZNF274Q96GC6 653 aaPredicted RBP29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 NAP1L2Q9ULW6 460 aaPredicted RBP29.37■■■□□ 2.29
NSMCE4A-201ENST00000369017 KLF18A0A0U1RQI7 1052 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 RASSF10A6NK89 507 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 ZBTB43O43298 467 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 SLC10A3P09131 477 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 KIF5BP33176 963 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 INHBEP58166 350 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 TOB2Q14106 344 aaPredicted RBP29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 SLFN13Q68D06 897 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 CCDC84Q86UT8 332 aaPredicted RBP29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 CTCFLQ8NI51 663 aaPredicted RBP29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 C12orf42Q96LP6 360 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 ZSCAN31Q96LW9 406 aaPredicted RBP29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 LIMCH1Q9UPQ0 1083 aa29.36■■■□□ 2.29
NSMCE4A-201ENST00000369017 A0A0G2JLL6 359 aaPredicted RBP29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 CCDC196A0A1B0GTZ2 297 aa29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 MANSC4A6NHS7 340 aaPredicted RBP29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 C1QTNF8P60827 252 aa29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 PABPC4Q13310 644 aaKnown RBP eCLIP29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 GPATCH4Q5T3I0 446 aaKnown RBP29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 APOA5Q6Q788 366 aa29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 PRRT2Q7Z6L0 340 aaPredicted RBP29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 RASAL3Q86YV0 1011 aa29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 REM2Q8IYK8 340 aaPredicted RBP29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 GMCL1Q96IK5 515 aa29.35■■■□□ 2.29
NSMCE4A-201ENST00000369017 SLC1A4P43007 532 aa29.34■■■□□ 2.29
NSMCE4A-201ENST00000369017 HMGCS2P54868 508 aa29.34■■■□□ 2.29
NSMCE4A-201ENST00000369017 APOBRQ0VD83 1088 aa29.34■■■□□ 2.29
NSMCE4A-201ENST00000369017 COL9A3Q14050 684 aaPredicted RBP29.34■■■□□ 2.29
NSMCE4A-201ENST00000369017 ZYXQ15942 572 aaKnown RBP29.34■■■□□ 2.29
NSMCE4A-201ENST00000369017 CNKSR2Q8WXI2 1034 aa29.34■■■□□ 2.29
NSMCE4A-201ENST00000369017 WDR46O15213 610 aaKnown RBP29.33■■■□□ 2.29
NSMCE4A-201ENST00000369017 GNAQP50148 359 aa29.33■■■□□ 2.29
NSMCE4A-201ENST00000369017 ASPRV1Q53RT3 343 aa29.33■■■□□ 2.29
NSMCE4A-201ENST00000369017 GPHNQ9NQX3 736 aaPredicted RBP29.33■■■□□ 2.29
NSMCE4A-201ENST00000369017 RBM28Q9NW13 759 aaKnown RBP29.33■■■□□ 2.29
NSMCE4A-201ENST00000369017 DHX16O60231 1041 aaKnown RBP29.32■■■□□ 2.28
NSMCE4A-201ENST00000369017 NDUFB10O96000 172 aa29.32■■■□□ 2.28
NSMCE4A-201ENST00000369017 PARP1P09874 1014 aaKnown RBP29.32■■■□□ 2.28
NSMCE4A-201ENST00000369017 TROAPQ12815 778 aa29.32■■■□□ 2.28
NSMCE4A-201ENST00000369017 NOGQ13253 232 aa29.32■■■□□ 2.28
NSMCE4A-201ENST00000369017 NUP133Q8WUM0 1156 aa29.32■■■□□ 2.28
NSMCE4A-201ENST00000369017 SH2B1Q9NRF2 756 aaPredicted RBP29.32■■■□□ 2.28
NSMCE4A-201ENST00000369017 GOLGA8BA8MQT2 603 aa29.31■■■□□ 2.28
NSMCE4A-201ENST00000369017 PDHBP11177 359 aa29.31■■■□□ 2.28
NSMCE4A-201ENST00000369017 BMP3P12645 472 aa29.31■■■□□ 2.28
NSMCE4A-201ENST00000369017 METAP2P50579 478 aaKnown RBP eCLIP29.31■■■□□ 2.28
NSMCE4A-201ENST00000369017 SREBF2Q12772 1141 aa29.31■■■□□ 2.28
NSMCE4A-201ENST00000369017 LZTS2Q9BRK4 669 aa29.31■■■□□ 2.28
NSMCE4A-201ENST00000369017 EMILIN3Q9NT22 766 aa29.31■■■□□ 2.28
NSMCE4A-201ENST00000369017 SNHG28P0DPA3 235 aa29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 HSPA6P17066 643 aa29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 CCDC96Q2M329 555 aa29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 OTUD7BQ6GQQ9 843 aa29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 CPLX2Q6PUV4 134 aaKnown RBP29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 GADL1Q6ZQY3 521 aa29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 MICU3Q86XE3 530 aa29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 FANCBQ8NB91 859 aa29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 SLKQ9H2G2 1235 aaPredicted RBP29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 SENP2Q9HC62 589 aa29.3■■■□□ 2.28
NSMCE4A-201ENST00000369017 BRPF3Q9ULD4 1205 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms