RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 PDE8BO95263 885 aa13.01□□□□□ -0.33
TUBE1-201ENST00000368657 MYOGP15173 224 aa13.01□□□□□ -0.33
TUBE1-201ENST00000368657 PUS10Q3MIT2 529 aaKnown RBP13.01□□□□□ -0.33
TUBE1-201ENST00000368657 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
TUBE1-201ENST00000368657 PRAMEF19Q5SWL8 479 aa13.01□□□□□ -0.33
TUBE1-201ENST00000368657 C8orf58Q8NAV2 365 aa13.01□□□□□ -0.33
TUBE1-201ENST00000368657 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
TUBE1-201ENST00000368657 CACNA1BQ00975 2339 aa13□□□□□ -0.33
TUBE1-201ENST00000368657 ASNSP08243 561 aa13□□□□□ -0.33
TUBE1-201ENST00000368657 IFIT1P09914 478 aaKnown RBP13□□□□□ -0.33
TUBE1-201ENST00000368657 PRDX5P30044 214 aa13□□□□□ -0.33
TUBE1-201ENST00000368657 GNAI1P63096 354 aa13□□□□□ -0.33
TUBE1-201ENST00000368657 KRT40Q6A162 431 aa13□□□□□ -0.33
TUBE1-201ENST00000368657 OTOP2Q7RTS6 562 aa13□□□□□ -0.33
TUBE1-201ENST00000368657 DNAAF4Q8WXU2 420 aa13□□□□□ -0.33
TUBE1-201ENST00000368657 DDX4Q9NQI0 724 aaKnown RBP13□□□□□ -0.33
TUBE1-201ENST00000368657 ZFHX2Q9C0A1 2572 aaPredicted RBP12.99□□□□□ -0.33
TUBE1-201ENST00000368657 ELP1O95163 1332 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 MOXD2PA6NHM9 499 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 PGK1P00558 417 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 ID4P47928 161 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 CDK7P50613 346 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 ACLYP53396 1101 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 PICALMQ13492 652 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 BMP8AQ7Z5Y6 402 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 SLF2Q8IX21 1173 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
TUBE1-201ENST00000368657 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.99□□□□□ -0.33
TUBE1-201ENST00000368657 ANKS1AQ92625 1134 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 A0A0G2JMZ2 1700 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 CACNA1GO43497 2377 aa12.99□□□□□ -0.33
TUBE1-201ENST00000368657 RFX7Q2KHR2 1363 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 PTPRZ1P23471 2315 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-201ENST00000368657 GRXCR2A6NFK2 248 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 FAM196BA6NMK8 535 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 TLR3O15455 904 aaKnown RBP12.98□□□□□ -0.33
TUBE1-201ENST00000368657 ATP2A2P16615 1042 aaKnown RBP12.98□□□□□ -0.33
TUBE1-201ENST00000368657 ADORA2AP29274 412 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L24Q0WX57 530 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 LBX2Q6XYB7 198 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-201ENST00000368657 PPP1R12CQ9BZL4 782 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 UBE2ZQ9H832 354 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-201ENST00000368657 CERS4Q9HA82 394 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
TUBE1-201ENST00000368657 HERC5Q9UII4 1024 aaKnown RBP12.98□□□□□ -0.33
TUBE1-201ENST00000368657 SALL1Q9NSC2 1324 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 CA3P07451 260 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
TUBE1-201ENST00000368657 TCF15Q12870 199 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 RRP1BQ14684 758 aaKnown RBP12.97□□□□□ -0.33
TUBE1-201ENST00000368657 IER5LQ5T953 404 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
TUBE1-201ENST00000368657 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 ARNTL2Q8WYA1 636 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 GLT1D1Q96MS3 346 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 TRPC6Q9Y210 931 aa12.97□□□□□ -0.33
TUBE1-201ENST00000368657 SMCHD1A6NHR9 2005 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
TUBE1-201ENST00000368657 IL9P15248 144 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 CYP2C18P33260 490 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 GRB10Q13322 594 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 G2E3Q7L622 706 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 VGLL2Q8N8G2 317 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 PRKAG3Q9UGI9 489 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 PCDHB13Q9Y5F0 798 aa12.96□□□□□ -0.33
TUBE1-201ENST00000368657 ATAD5Q96QE3 1844 aa12.95□□□□□ -0.34
TUBE1-201ENST00000368657 ZNF536O15090 1300 aa12.95□□□□□ -0.34
TUBE1-201ENST00000368657 ARVCFO00192 962 aa12.95□□□□□ -0.34
TUBE1-201ENST00000368657 COBLO75128 1261 aa12.95□□□□□ -0.34
TUBE1-201ENST00000368657 PYGBP11216 843 aa12.95□□□□□ -0.34
TUBE1-201ENST00000368657 PUM3Q15397 648 aaKnown RBP12.95□□□□□ -0.34
TUBE1-201ENST00000368657 CATSPERGQ6ZRH7 1159 aa12.95□□□□□ -0.34
TUBE1-201ENST00000368657 ZGPATQ8N5A5 531 aaKnown RBP12.95□□□□□ -0.34
TUBE1-201ENST00000368657 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
TUBE1-201ENST00000368657 BTBD7Q9P203 1132 aa12.95□□□□□ -0.34
TUBE1-201ENST00000368657 FAM50BQ9Y247 325 aa12.95□□□□□ -0.34
TUBE1-201ENST00000368657 ZBBXA8MT70 800 aa12.94□□□□□ -0.34
TUBE1-201ENST00000368657 KIF28PB7ZC32 967 aa12.94□□□□□ -0.34
TUBE1-201ENST00000368657 PROB1E7EW31 1015 aa12.94□□□□□ -0.34
TUBE1-201ENST00000368657 LPXNO60711 386 aa12.94□□□□□ -0.34
TUBE1-201ENST00000368657 ADAMTS4O75173 837 aa12.94□□□□□ -0.34
TUBE1-201ENST00000368657 FGFR2P21802 821 aa12.94□□□□□ -0.34
TUBE1-201ENST00000368657 KCNA5P22460 613 aa12.94□□□□□ -0.34
TUBE1-201ENST00000368657 TAP1Q03518 808 aa12.94□□□□□ -0.34
TUBE1-201ENST00000368657 FKBP5Q13451 457 aaPredicted RBP12.94□□□□□ -0.34
TUBE1-201ENST00000368657 KCNA10Q16322 511 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms