RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
TPM3-210ENST00000368530 NOL10Q9BSC4 688 aaKnown RBP11.87□□□□□ -0.51
TPM3-210ENST00000368530 TMOD4Q9NZQ9 345 aa11.87□□□□□ -0.51
TPM3-210ENST00000368530 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
TPM3-210ENST00000368530 SGSM2O43147 1006 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 CNMDO75829 334 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 MAPK4P31152 587 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 ERVK-9P63128 1117 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 ERVK-24P63145 666 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 NMIQ13287 307 aaPredicted RBP11.86□□□□□ -0.51
TPM3-210ENST00000368530 GPR142Q7Z601 462 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 SOCS4Q8WXH5 440 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 C12orf42Q96LP6 360 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 C11orf49Q9H6J7 331 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 SAP30BPQ9UHR5 308 aaKnown RBP11.86□□□□□ -0.51
TPM3-210ENST00000368530 A0A0C4DFX4 3053 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 GH2P01242 217 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 IGHA2P01877 340 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 SYN1P17600 705 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 MCCP23508 829 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
TPM3-210ENST00000368530 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
TPM3-210ENST00000368530 RUFY2Q8WXA3 655 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 FAM227BQ96M60 508 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 HAUS7Q99871 368 aa11.86□□□□□ -0.51
TPM3-210ENST00000368530 CDK5RAP2Q96SN8 1893 aa11.85□□□□□ -0.51
TPM3-210ENST00000368530 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
TPM3-210ENST00000368530 CYP7A1P22680 504 aa11.85□□□□□ -0.51
TPM3-210ENST00000368530 MAGEA10P43363 369 aaPredicted RBP11.85□□□□□ -0.51
TPM3-210ENST00000368530 LRIT3Q3SXY7 679 aa11.85□□□□□ -0.51
TPM3-210ENST00000368530 GPR153Q6NV75 609 aa11.85□□□□□ -0.51
TPM3-210ENST00000368530 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
TPM3-210ENST00000368530 KIAA1211Q6ZU35 1233 aa11.85□□□□□ -0.51
TPM3-210ENST00000368530 TRMT44Q8IYL2 757 aaKnown RBP11.85□□□□□ -0.51
TPM3-210ENST00000368530 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
TPM3-210ENST00000368530 ANTXR1Q9H6X2 564 aa11.85□□□□□ -0.51
TPM3-210ENST00000368530 DDX60LQ5H9U9 1706 aaKnown RBP11.85□□□□□ -0.51
TPM3-210ENST00000368530 FOCADQ5VW36 1801 aa11.85□□□□□ -0.51
TPM3-210ENST00000368530 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 MYO5AQ9Y4I1 1855 aaKnown RBP11.84□□□□□ -0.51
TPM3-210ENST00000368530 A0A0D9SFI3 127 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 HIP1O00291 1037 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 GOLIM4O00461 696 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 RABEP1Q15276 862 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 CATSPERGQ6ZRH7 1159 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 PLEKHH3Q7Z736 793 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 MIGA1Q8NAN2 632 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 SLC17A8Q8NDX2 589 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 ACER1Q8TDN7 264 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 GTF3C2Q8WUA4 911 aaPredicted RBP11.84□□□□□ -0.51
TPM3-210ENST00000368530 PAGR1Q9BTK6 254 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 LSG1Q9H089 658 aaKnown RBP11.84□□□□□ -0.51
TPM3-210ENST00000368530 EHD4Q9H223 541 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 FLRT1Q9NZU1 646 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 RABGAP1Q9Y3P9 1069 aa11.84□□□□□ -0.51
TPM3-210ENST00000368530 CHGBP05060 677 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 HLA-DOAP06340 250 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 ZKSCAN1P17029 563 aaPredicted RBP11.83□□□□□ -0.52
TPM3-210ENST00000368530 GUCY1A2P33402 732 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 RGS2P41220 211 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 PLCD1P51178 756 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 MAP2K5Q13163 448 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 LBX2Q6XYB7 198 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 SNX21Q969T3 373 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 RIOK1Q9BRS2 568 aaKnown RBP11.83□□□□□ -0.52
TPM3-210ENST00000368530 KIAA1683Q9H0B3 1180 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 PAG1Q9NWQ8 432 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 BTBD7Q9P203 1132 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 MYH7P12883 1935 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 RAD50Q92878 1312 aa11.83□□□□□ -0.52
TPM3-210ENST00000368530 USP17L15C9J2P7 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 USP17L13C9JLJ4 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 USP17L11C9JVI0 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 USP17L18D6R9N7 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 USP17L22D6RA61 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 USP17L17D6RBQ6 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 USP17L19D6RCP7 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 USP17L20D6RJB6 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 IDH1O75874 414 aaKnown RBP11.82□□□□□ -0.52
TPM3-210ENST00000368530 SHMT1P34896 483 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 PTH1RQ03431 593 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 GABPAQ06546 454 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 USP17L24Q0WX57 530 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 Q7L0L9 218 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 TDHQ8IZJ6 230 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 MAGEB6Q8N7X4 407 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 APBA2Q99767 749 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 SERPINB13Q9UIV8 391 aa11.82□□□□□ -0.52
TPM3-210ENST00000368530 DLL1O00548 723 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 HOXC6P09630 235 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 VCAM1P19320 739 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 PTPREP23469 700 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 EVX2Q03828 476 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 ZYXQ15942 572 aaKnown RBP11.81□□□□□ -0.52
TPM3-210ENST00000368530 DEFB123Q8N688 67 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 NPLOC4Q8TAT6 608 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms