RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 SLC27A2O14975 620 aa22.04■■□□□ 1.12
LMNA-204ENST00000368298 VCAM1P19320 739 aa22.04■■□□□ 1.12
LMNA-204ENST00000368298 ZYXQ15942 572 aaKnown RBP22.04■■□□□ 1.12
LMNA-204ENST00000368298 TTC14Q96N46 770 aa22.04■■□□□ 1.12
LMNA-204ENST00000368298 ADGRA2Q96PE1 1338 aa22.04■■□□□ 1.12
LMNA-204ENST00000368298 PARK7Q99497 189 aaKnown RBP22.04■■□□□ 1.12
LMNA-204ENST00000368298 GOPCQ9HD26 462 aa22.04■■□□□ 1.12
LMNA-204ENST00000368298 ZSWIM5Q9P217 1185 aa22.04■■□□□ 1.12
LMNA-204ENST00000368298 PNMA3Q9UL41 463 aa22.04■■□□□ 1.12
LMNA-204ENST00000368298 TAF6LQ9Y6J9 622 aa22.04■■□□□ 1.12
LMNA-204ENST00000368298 B4E1Z4 1266 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 E7EWF7 191 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 NMT2O60551 498 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 KDM4AO75164 1064 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 KIAA1755Q5JYT7 1200 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 CREB3L3Q68CJ9 461 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 PRDM10Q9NQV6 1147 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 TSKSQ9UJT2 592 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L15C9J2P7 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L13C9JLJ4 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L11C9JVI0 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L18D6R9N7 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L22D6RA61 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L17D6RBQ6 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L19D6RCP7 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L20D6RJB6 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 GPR25O00155 361 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 OSBPP22059 807 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 ATP2B2Q01814 1243 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 USP17L24Q0WX57 530 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 TRDNQ13061 729 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 TSGA10IPQ3SY00 556 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 CCDC178Q5BJE1 867 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 RNF20Q5VTR2 975 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 CATSPERGQ6ZRH7 1159 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 STOX1Q6ZVD7 989 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 GMCL1P1Q8NEA9 526 aa22.03■■□□□ 1.12
LMNA-204ENST00000368298 ASCC2Q9H1I8 757 aaPredicted RBP22.03■■□□□ 1.12
LMNA-204ENST00000368298 CYP2C8P10632 490 aa22.02■■□□□ 1.12
LMNA-204ENST00000368298 RCSD1Q6JBY9 416 aa22.02■■□□□ 1.12
LMNA-204ENST00000368298 C17orf99Q6UX52 265 aa22.02■■□□□ 1.12
LMNA-204ENST00000368298 IQCA1Q86XH1 822 aa22.02■■□□□ 1.12
LMNA-204ENST00000368298 DGKHQ86XP1 1220 aa22.02■■□□□ 1.12
LMNA-204ENST00000368298 NCOA7Q8NI08 942 aa22.02■■□□□ 1.12
LMNA-204ENST00000368298 KCNB2Q92953 911 aa22.02■■□□□ 1.12
LMNA-204ENST00000368298 F5H6K3 240 aa22.01■■□□□ 1.11
LMNA-204ENST00000368298 WDR46O15213 610 aaKnown RBP22.01■■□□□ 1.11
LMNA-204ENST00000368298 KLRC3Q07444 240 aa22.01■■□□□ 1.11
LMNA-204ENST00000368298 ANKS1AQ92625 1134 aa22.01■■□□□ 1.11
LMNA-204ENST00000368298 STX8Q9UNK0 236 aa22.01■■□□□ 1.11
LMNA-204ENST00000368298 C8orf34Q49A92 452 aa22■■□□□ 1.11
LMNA-204ENST00000368298 TNS4Q8IZW8 715 aa22■■□□□ 1.11
LMNA-204ENST00000368298 RPAP3Q9H6T3 665 aaPredicted RBP22■■□□□ 1.11
LMNA-204ENST00000368298 TOP1P11387 765 aaKnown RBP21.99■■□□□ 1.11
LMNA-204ENST00000368298 HSPA4P34932 840 aa21.99■■□□□ 1.11
LMNA-204ENST00000368298 GCLCP48506 637 aaPredicted RBP21.99■■□□□ 1.11
LMNA-204ENST00000368298 IRX3P78415 501 aaPredicted RBP21.99■■□□□ 1.11
LMNA-204ENST00000368298 LBX2Q6XYB7 198 aa21.99■■□□□ 1.11
LMNA-204ENST00000368298 SPICE1Q8N0Z3 855 aa21.99■■□□□ 1.11
LMNA-204ENST00000368298 ZSCAN10Q96SZ4 725 aaPredicted RBP21.99■■□□□ 1.11
LMNA-204ENST00000368298 P2RX7Q99572 595 aaKnown RBP21.99■■□□□ 1.11
LMNA-204ENST00000368298 EIF5BO60841 1220 aaKnown RBP21.98■■□□□ 1.11
LMNA-204ENST00000368298 NDUFB10O96000 172 aa21.98■■□□□ 1.11
LMNA-204ENST00000368298 BCRP11274 1271 aa21.98■■□□□ 1.11
LMNA-204ENST00000368298 CYB5R4Q7L1T6 521 aa21.98■■□□□ 1.11
LMNA-204ENST00000368298 RALYLQ86SE5 291 aaKnown RBP21.98■■□□□ 1.11
LMNA-204ENST00000368298 ZNF296Q8WUU4 475 aaPredicted RBP21.98■■□□□ 1.11
LMNA-204ENST00000368298 USP26Q9BXU7 913 aa21.98■■□□□ 1.11
LMNA-204ENST00000368298 RLFQ13129 1914 aa21.98■■□□□ 1.11
LMNA-204ENST00000368298 FKTNO75072 461 aa21.97■■□□□ 1.11
LMNA-204ENST00000368298 MB21D2Q8IYB1 491 aaPredicted RBP21.97■■□□□ 1.11
LMNA-204ENST00000368298 RASEFQ8IZ41 740 aa21.97■■□□□ 1.11
LMNA-204ENST00000368298 LRRC47Q8N1G4 583 aaKnown RBP21.97■■□□□ 1.11
LMNA-204ENST00000368298 SMCR8Q8TEV9 937 aaPredicted RBP21.97■■□□□ 1.11
LMNA-204ENST00000368298 GTF3C2Q8WUA4 911 aaPredicted RBP21.97■■□□□ 1.11
LMNA-204ENST00000368298 GMCL1Q96IK5 515 aa21.97■■□□□ 1.11
LMNA-204ENST00000368298 TMEM47Q9BQJ4 181 aa21.97■■□□□ 1.11
LMNA-204ENST00000368298 ZKSCAN3Q9BRR0 538 aa21.97■■□□□ 1.11
LMNA-204ENST00000368298 MTA3Q9BTC8 594 aa21.97■■□□□ 1.11
LMNA-204ENST00000368298 MYPNQ86TC9 1320 aa21.97■■□□□ 1.11
LMNA-204ENST00000368298 ZKSCAN1P17029 563 aaPredicted RBP21.96■■□□□ 1.11
LMNA-204ENST00000368298 HERVK_113P62684 666 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 SP3Q02447 781 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 COG2Q14746 738 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 SEC23AQ15436 765 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 ENAHQ8N8S7 591 aaPredicted RBP21.96■■□□□ 1.11
LMNA-204ENST00000368298 UBAC1Q9BSL1 405 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 HOXC10Q9NYD6 342 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 CPA4Q9UI42 421 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 PARP14Q460N5 1801 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 TNKSO95271 1327 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 KRT32Q14532 448 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 SLFN13Q68D06 897 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 POTEEQ6S8J3 1075 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 MORF4L1Q9UBU8 362 aa21.96■■□□□ 1.11
LMNA-204ENST00000368298 CASP8AP2Q9UKL3 1982 aa21.95■■□□□ 1.1
LMNA-204ENST00000368298 ANTXR2P58335 489 aa21.95■■□□□ 1.1
LMNA-204ENST00000368298 FAM110CQ1W6H9 321 aa21.95■■□□□ 1.1
LMNA-204ENST00000368298 TANGO6Q9C0B7 1094 aa21.95■■□□□ 1.1
LMNA-204ENST00000368298 ADAMTS5Q9UNA0 930 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms