RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RUFY2Q8WXA3 655 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 CEP95Q96GE4 821 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 ABHD8Q96I13 439 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 RPAP3Q9H6T3 665 aaPredicted RBP26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 EFCC1Q9HA90 598 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 MTMR4Q9NYA4 1195 aa26.63■■□□□ 1.85
ECHDC1-203ENST00000368291 SGSM2O43147 1006 aa26.62■■□□□ 1.85
ECHDC1-203ENST00000368291 ECM2O94769 699 aaPredicted RBP26.62■■□□□ 1.85
ECHDC1-203ENST00000368291 TSPY3P0CV98 308 aa26.62■■□□□ 1.85
ECHDC1-203ENST00000368291 TSPY8P0CW00 308 aa26.62■■□□□ 1.85
ECHDC1-203ENST00000368291 FAM110CQ1W6H9 321 aa26.62■■□□□ 1.85
ECHDC1-203ENST00000368291 TBC1D10CQ8IV04 446 aa26.62■■□□□ 1.85
ECHDC1-203ENST00000368291 SH2D4AQ9H788 454 aa26.62■■□□□ 1.85
ECHDC1-203ENST00000368291 HTTP42858 3142 aa26.62■■□□□ 1.85
ECHDC1-203ENST00000368291 PEX10O60683 326 aa26.61■■□□□ 1.85
ECHDC1-203ENST00000368291 SPICE1Q8N0Z3 855 aa26.61■■□□□ 1.85
ECHDC1-203ENST00000368291 NKX2-3Q8TAU0 364 aa26.61■■□□□ 1.85
ECHDC1-203ENST00000368291 LPAR1Q92633 364 aa26.61■■□□□ 1.85
ECHDC1-203ENST00000368291 TRIM47Q96LD4 638 aa26.61■■□□□ 1.85
ECHDC1-203ENST00000368291 PSMC4P43686 418 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 PTH1RQ03431 593 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 KIF22Q14807 665 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 FBXO46Q6PJ61 603 aaPredicted RBP26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 STAG1Q8WVM7 1258 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 TXNRD2Q9NNW7 524 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 IL17RBQ9NRM6 502 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 RBPJLQ9UBG7 517 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 MORF4L1Q9UBU8 362 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 A0A0G2JMZ2 1700 aa26.6■■□□□ 1.85
ECHDC1-203ENST00000368291 AKNAD1Q5T1N1 836 aa26.59■■□□□ 1.85
ECHDC1-203ENST00000368291 MKL1Q969V6 931 aa26.59■■□□□ 1.85
ECHDC1-203ENST00000368291 CLIP2Q9UDT6 1046 aa26.59■■□□□ 1.85
ECHDC1-203ENST00000368291 COL11A1P12107 1806 aaPredicted RBP26.59■■□□□ 1.85
ECHDC1-203ENST00000368291 TSPY2A6NKD2 308 aa26.58■■□□□ 1.85
ECHDC1-203ENST00000368291 ZNF213O14771 459 aa26.58■■□□□ 1.85
ECHDC1-203ENST00000368291 PTPN22Q9Y2R2 807 aa26.58■■□□□ 1.85
ECHDC1-203ENST00000368291 SPDYE16A6NNV3 312 aaPredicted RBP26.58■■□□□ 1.84
ECHDC1-203ENST00000368291 RANBP6O60518 1105 aaKnown RBP26.58■■□□□ 1.84
ECHDC1-203ENST00000368291 NMT2O60551 498 aa26.58■■□□□ 1.84
ECHDC1-203ENST00000368291 TTLL1O95922 423 aa26.58■■□□□ 1.84
ECHDC1-203ENST00000368291 LBX2Q6XYB7 198 aa26.58■■□□□ 1.84
ECHDC1-203ENST00000368291 GOPCQ9HD26 462 aa26.58■■□□□ 1.84
ECHDC1-203ENST00000368291 PLXNB2O15031 1838 aa26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 WDR46O15213 610 aaKnown RBP26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 PCP11498 1178 aaKnown RBP26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 NOVP48745 357 aa26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 ARHGEF6Q15052 776 aa26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 Q3C1V9 767 aa26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 RRP12Q5JTH9 1297 aaKnown RBP26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 MFSD6Q6ZSS7 791 aa26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 CTNNA3Q9UI47 895 aa26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 HPS5Q9UPZ3 1129 aa26.57■■□□□ 1.84
ECHDC1-203ENST00000368291 NEDD4P46934 1319 aa26.56■■□□□ 1.84
ECHDC1-203ENST00000368291 F5H6K3 240 aa26.56■■□□□ 1.84
ECHDC1-203ENST00000368291 CNMDO75829 334 aa26.56■■□□□ 1.84
ECHDC1-203ENST00000368291 GNRH1P01148 92 aa26.56■■□□□ 1.84
ECHDC1-203ENST00000368291 KLRC3Q07444 240 aa26.56■■□□□ 1.84
ECHDC1-203ENST00000368291 GTF3C2Q8WUA4 911 aaPredicted RBP26.56■■□□□ 1.84
ECHDC1-203ENST00000368291 TANGO6Q9C0B7 1094 aa26.56■■□□□ 1.84
ECHDC1-203ENST00000368291 TOMM22Q9NS69 142 aa26.56■■□□□ 1.84
ECHDC1-203ENST00000368291 FMNL1O95466 1100 aaPredicted RBP26.55■■□□□ 1.84
ECHDC1-203ENST00000368291 COG2Q14746 738 aa26.55■■□□□ 1.84
ECHDC1-203ENST00000368291 IMMTQ16891 758 aaKnown RBP26.55■■□□□ 1.84
ECHDC1-203ENST00000368291 LRRC47Q8N1G4 583 aaKnown RBP26.55■■□□□ 1.84
ECHDC1-203ENST00000368291 ESYT1Q9BSJ8 1104 aa26.55■■□□□ 1.84
ECHDC1-203ENST00000368291 SYNPO2Q9UMS6 1093 aa26.55■■□□□ 1.84
ECHDC1-203ENST00000368291 NDUFB10O96000 172 aa26.54■■□□□ 1.84
ECHDC1-203ENST00000368291 FCGRTP55899 365 aa26.54■■□□□ 1.84
ECHDC1-203ENST00000368291 IFFO2Q5TF58 517 aa26.54■■□□□ 1.84
ECHDC1-203ENST00000368291 PAGR1Q9BTK6 254 aa26.54■■□□□ 1.84
ECHDC1-203ENST00000368291 RNF41Q9H4P4 317 aaPredicted RBP26.54■■□□□ 1.84
ECHDC1-203ENST00000368291 SRRDQ9UH36 339 aa26.54■■□□□ 1.84
ECHDC1-203ENST00000368291 RABGAP1Q9Y3P9 1069 aa26.54■■□□□ 1.84
ECHDC1-203ENST00000368291 PTCH2Q9Y6C5 1203 aa26.54■■□□□ 1.84
ECHDC1-203ENST00000368291 ERVK-9P63128 1117 aa26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 ERVK-24P63145 666 aa26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 FAM83BQ5T0W9 1011 aa26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 GPRC5AQ8NFJ5 357 aa26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 MAP4K1Q92918 833 aa26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 NUP88Q99567 741 aaPredicted RBP26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 TCP11L1Q9NUJ3 509 aa26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 FBXO28Q9NVF7 368 aa26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 BTBD7Q9P203 1132 aa26.53■■□□□ 1.84
ECHDC1-203ENST00000368291 CENPFP49454 3210 aa26.52■■□□□ 1.84
ECHDC1-203ENST00000368291 DSG3P32926 999 aa26.52■■□□□ 1.84
ECHDC1-203ENST00000368291 GMCL1P1Q8NEA9 526 aa26.52■■□□□ 1.84
ECHDC1-203ENST00000368291 HOXC10Q9NYD6 342 aa26.52■■□□□ 1.84
ECHDC1-203ENST00000368291 GABRQQ9UN88 632 aa26.52■■□□□ 1.84
ECHDC1-203ENST00000368291 STX8Q9UNK0 236 aa26.52■■□□□ 1.84
ECHDC1-203ENST00000368291 RAD21O60216 631 aa26.51■■□□□ 1.83
ECHDC1-203ENST00000368291 FLOT1O75955 427 aa26.51■■□□□ 1.83
ECHDC1-203ENST00000368291 CYP21A2P08686 494 aa26.51■■□□□ 1.83
ECHDC1-203ENST00000368291 LSG1Q9H089 658 aaKnown RBP26.51■■□□□ 1.83
ECHDC1-203ENST00000368291 TNPO2O14787 897 aaKnown RBP26.5■■□□□ 1.83
ECHDC1-203ENST00000368291 PRMT2P55345 433 aa26.5■■□□□ 1.83
ECHDC1-203ENST00000368291 PRKCZQ05513 592 aa26.5■■□□□ 1.83
ECHDC1-203ENST00000368291 PPP4R3BQ5MIZ7 849 aa26.5■■□□□ 1.83
ECHDC1-203ENST00000368291 ATG4CQ96DT6 458 aa26.5■■□□□ 1.83
ECHDC1-203ENST00000368291 PORCNQ9H237 461 aa26.5■■□□□ 1.83
ECHDC1-203ENST00000368291 U3KPZ7 1027 aaPredicted RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms