RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 USP17L15C9J2P7 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 USP17L13C9JLJ4 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 USP17L11C9JVI0 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 USP17L18D6R9N7 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 USP17L22D6RA61 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 USP17L17D6RBQ6 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 USP17L19D6RCP7 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 USP17L20D6RJB6 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 HIP1O00291 1037 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
CD48-202ENST00000368046 AKR1B1P15121 316 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 HOXD10P28358 340 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 PSMC4P43686 418 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 PRMT2P55345 433 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 CAP1Q01518 475 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 USP17L24Q0WX57 530 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 NMIQ13287 307 aaPredicted RBP11.75□□□□□ -0.53
CD48-202ENST00000368046 ALX1Q15699 326 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 CCDC129Q6ZRS4 1044 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 FEZ1Q99689 392 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 KANSL2Q9H9L4 492 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 HPS5Q9UPZ3 1129 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 TMX2Q9Y320 296 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 DOCK1Q14185 1865 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 MYH1P12882 1939 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 A0A1W2PRG0 241 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
CD48-202ENST00000368046 FGAP02671 866 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 RASA1P20936 1047 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 MFAP1P55081 439 aaKnown RBP11.74□□□□□ -0.53
CD48-202ENST00000368046 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
CD48-202ENST00000368046 PDE4BQ07343 736 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 ZYXQ15942 572 aaKnown RBP11.74□□□□□ -0.53
CD48-202ENST00000368046 CATSPERGQ6ZRH7 1159 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 ARHGAP39Q9C0H5 1083 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 SH2D4AQ9H788 454 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 ARHGEF10LQ9HCE6 1279 aa11.74□□□□□ -0.53
CD48-202ENST00000368046 FOXP2O15409 715 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 HSPD1P10809 573 aaKnown RBP11.73□□□□□ -0.53
CD48-202ENST00000368046 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
CD48-202ENST00000368046 CTGFP29279 349 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 FCGRTP55899 365 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 HERVK_113P62684 666 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 ICA1Q05084 483 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 PPARAQ07869 468 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 FAM110CQ1W6H9 321 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 TTC22Q5TAA0 569 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 VPS53Q5VIR6 699 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 ANKRD13CQ8N6S4 541 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 TRIM47Q96LD4 638 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.73□□□□□ -0.53
CD48-202ENST00000368046 HOXC10Q9NYD6 342 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 RBPJLQ9UBG7 517 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 MORF4L1Q9UBU8 362 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 ANAPC4Q9UJX5 808 aa11.73□□□□□ -0.53
CD48-202ENST00000368046 PHIPQ8WWQ0 1821 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 ROBO3Q96MS0 1386 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
CD48-202ENST00000368046 VCAM1P19320 739 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 CWC27Q6UX04 472 aaKnown RBP11.72□□□□□ -0.53
CD48-202ENST00000368046 NBPF11Q86T75 865 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 ZNF589Q86UQ0 364 aaPredicted RBP11.72□□□□□ -0.53
CD48-202ENST00000368046 GTF3C2Q8WUA4 911 aaPredicted RBP11.72□□□□□ -0.53
CD48-202ENST00000368046 LPAR1Q92633 364 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 VCPKMTQ9H867 229 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 DIAPH3Q9NSV4 1193 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 SRRDQ9UH36 339 aa11.72□□□□□ -0.53
CD48-202ENST00000368046 CCDC171Q6TFL3 1326 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 PRDM1O75626 825 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 FGRP09769 529 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
CD48-202ENST00000368046 ATP2B2Q01814 1243 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 COG2Q14746 738 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 Q3C1V9 767 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 CENPQQ7L2Z9 268 aaPredicted RBP11.71□□□□□ -0.53
CD48-202ENST00000368046 GPRC5AQ8NFJ5 357 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 MKL1Q969V6 931 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 RPAP3Q9H6T3 665 aaPredicted RBP11.71□□□□□ -0.53
CD48-202ENST00000368046 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.53
CD48-202ENST00000368046 DDX60LQ5H9U9 1706 aaKnown RBP11.71□□□□□ -0.54
CD48-202ENST00000368046 IGKV6D-41A0A0C4DH26 115 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 TNPO2O14787 897 aaKnown RBP11.7□□□□□ -0.54
CD48-202ENST00000368046 TSPY3P0CV98 308 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 TSPY8P0CW00 308 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 TFAP4Q01664 338 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 KIAA1755Q5JYT7 1200 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 LBX2Q6XYB7 198 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 CLEC10AQ8IUN9 316 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 COA7Q96BR5 231 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 MTMR4Q9NYA4 1195 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 CLIP2Q9UDT6 1046 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 PTCH2Q9Y6C5 1203 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 MYH7P12883 1935 aa11.7□□□□□ -0.54
CD48-202ENST00000368046 ZMYM6O95789 1325 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 MYPNQ86TC9 1320 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms