RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 PCDHAC2Q9Y5I4 1007 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 PAPPA2Q9BXP8 1791 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 AOX1Q06278 1338 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 MYO3BQ8WXR4 1341 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 TRAF5O00463 557 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 NEFLP07196 543 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 GTF2F1P35269 517 aaKnown RBP eCLIP3.84□□□□□ -1.79
PTPRC-203ENST00000367367 RASGRF1Q13972 1273 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 NBPF9Q3BBW0 867 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 CCDC102BQ68D86 513 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 B4GALNT3Q6L9W6 998 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 LIAT1Q6ZQX7 453 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 USP50Q70EL3 339 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-203ENST00000367367 CRIPAKQ8N1N5 446 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 PLPP7Q8NBV4 271 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 DBNDD2Q9BQY9 259 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 GLIS2Q9BZE0 524 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-203ENST00000367367 MYOZ2Q9NPC6 264 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 GGA3Q9NZ52 723 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 DBNLQ9UJU6 430 aaKnown RBP3.84□□□□□ -1.79
PTPRC-203ENST00000367367 CASP8AP2Q9UKL3 1982 aa3.84□□□□□ -1.79
PTPRC-203ENST00000367367 SIPA1L1O43166 1804 aa3.84□□□□□ -1.8
PTPRC-203ENST00000367367 LAMB1P07942 1786 aa3.84□□□□□ -1.8
PTPRC-203ENST00000367367 FAM205AQ6ZU69 1335 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 ADM5C9JUS6 153 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 WNT10BO00744 389 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 HMMRO75330 724 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 SNRPBP14678 240 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 HSPA6P17066 643 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 PRDX5P30044 214 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 ZNF280AP59817 542 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 FSTL1Q12841 308 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 SCARF1Q14162 830 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 ZNF394Q53GI3 561 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 TNNI3KQ59H18 835 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 ANGEL2Q5VTE6 544 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 GLYCTKQ8IVS8 523 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 RPAP2Q8IXW5 612 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 CNTROBQ8N137 903 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 EAF2Q96CJ1 260 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 CCDC8Q9H0W5 538 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 DCTN4Q9UJW0 460 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 TTF2Q9UNY4 1162 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 AKAP2Q9Y2D5 859 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 NOP58Q9Y2X3 529 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 PPME1Q9Y570 386 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 MRPL42Q9Y6G3 142 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 FPGT-TNNI3KV9GXZ4 949 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 PASKQ96RG2 1323 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 LOC102724159A0A0B4J2E5 919 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 TLDC2A0PJX2 215 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 CLRN2A0PK11 232 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 ZBBXA8MT70 800 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 SCAMP3O14828 347 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 GMPRP36959 345 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 MCAMP43121 646 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 GSK3AP49840 483 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 RBM5P52756 815 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 CBLBQ13191 982 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 PWP2Q15269 919 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 GORABQ5T7V8 394 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 RNF19BQ6ZMZ0 732 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 NOL8Q76FK4 1167 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 KRT26Q7Z3Y9 468 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 AACSQ86V21 672 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 C1orf216Q8TAB5 229 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 EXOC6Q8TAG9 804 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 RHPN1Q8TCX5 695 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 STAG1Q8WVM7 1258 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 SAP130Q9H0E3 1048 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 CHMP4BQ9H444 224 aaKnown RBP3.83□□□□□ -1.8
PTPRC-203ENST00000367367 ZNF408Q9H9D4 720 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 ABCF2Q9UG63 623 aa3.83□□□□□ -1.8
PTPRC-203ENST00000367367 DDX60LQ5H9U9 1706 aaKnown RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 HTTP42858 3142 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 DOCK1Q14185 1865 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 CTSHP09668 335 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 DNAJA1P31689 397 aaKnown RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 KCNMA1Q12791 1236 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 FOXC1Q12948 553 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 SF3A1Q15459 793 aaKnown RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 SWI5Q1ZZU3 235 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 CFAP100Q494V2 611 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 SWT1Q5T5J6 900 aaKnown RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 PRAMEF18Q5VWM3 479 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 BLOC1S3Q6QNY0 202 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 ERC1Q8IUD2 1116 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 RPUSD2Q8IZ73 545 aaKnown RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 TMEM87AQ8NBN3 555 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 TSEN2Q8NCE0 465 aaKnown RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 DCPSQ96C86 337 aaKnown RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 PRMT6Q96LA8 375 aaPredicted RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 GNL3LQ9NVN8 582 aaKnown RBP3.82□□□□□ -1.8
PTPRC-203ENST00000367367 HMG20BQ9P0W2 317 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 PARP2Q9UGN5 583 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 HDAC9Q9UKV0 1011 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 PHIPQ8WWQ0 1821 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 DOCK3Q8IZD9 2030 aa3.82□□□□□ -1.8
PTPRC-203ENST00000367367 THSD7BQ9C0I4 1608 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms