RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 GYPCP04921 128 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 PTGDRQ13258 359 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 KRT31Q15323 416 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 PUM3Q15397 648 aaKnown RBP9.24□□□□□ -0.93
CD46-208ENST00000367042 RNF41Q9H4P4 317 aaPredicted RBP9.24□□□□□ -0.93
CD46-208ENST00000367042 FAM204AQ9H8W3 233 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 MYO6Q9UM54 1294 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 C5P01031 1676 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 TNS3Q68CZ2 1445 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 MACROD2A1Z1Q3 448 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 SMIM22K7EJ46 135 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 DNA2P51530 1060 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 EARS2Q5JPH6 523 aaKnown RBP9.24□□□□□ -0.93
CD46-208ENST00000367042 BEND6Q5SZJ8 279 aaPredicted RBP9.24□□□□□ -0.93
CD46-208ENST00000367042 CYP26C1Q6V0L0 522 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 TMTC1Q8IUR5 882 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 GSPT2Q8IYD1 628 aaKnown RBP9.24□□□□□ -0.93
CD46-208ENST00000367042 NELFBQ8WX92 580 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 ESR2Q92731 530 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
CD46-208ENST00000367042 PSMB7Q99436 277 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 CHP1Q99653 195 aa9.24□□□□□ -0.93
CD46-208ENST00000367042 MAGEC2Q9UBF1 373 aaPredicted RBP9.24□□□□□ -0.93
CD46-208ENST00000367042 ADD3Q9UEY8 706 aaKnown RBP9.24□□□□□ -0.93
CD46-208ENST00000367042 KCNJ18B7U540 433 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 PLEKHA8P1O95397 391 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 ERCC3P19447 782 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 TRIM21P19474 475 aaKnown RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 MRPS25P82663 173 aaKnown RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 PAK1Q13153 545 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 KCNJ12Q14500 433 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 DNAJC21Q5F1R6 531 aaKnown RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 TTC38Q5R3I4 469 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 CTR9Q6PD62 1173 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 CADPS2Q86UW7 1296 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 IQUBQ8NA54 791 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 LPIN2Q92539 896 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 TRIM47Q96LD4 638 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 SCN11AQ9UI33 1791 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 GSG1L2A8MUP6 293 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 IL2RBP14784 551 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 FOXR1Q6PIV2 292 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 IQCA1Q86XH1 822 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 TMTC2Q8N394 836 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 RIN2Q8WYP3 895 aaPredicted RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 ABHD10Q9NUJ1 306 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 GDAQ9Y2T3 454 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 TRIM49BA6NDI0 452 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 IVLP07476 585 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 STAT6P42226 847 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 NAP1L1P55209 391 aaKnown RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 PPARAQ07869 468 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 CUL4BQ13620 913 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 NLRP10Q86W26 655 aa9.23□□□□□ -0.93
CD46-208ENST00000367042 GNL3LQ9NVN8 582 aaKnown RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 ZNHIT6Q9NWK9 470 aaKnown RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 LUC7L2Q9Y383 392 aaKnown RBP9.23□□□□□ -0.93
CD46-208ENST00000367042 MYH15Q9Y2K3 1946 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 ERVV-2B6SEH9 535 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 SARSP49591 514 aaKnown RBP9.22□□□□□ -0.93
CD46-208ENST00000367042 ERVK-24P63145 666 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 TICAM2Q86XR7 235 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 CTCFLQ8NI51 663 aaPredicted RBP9.22□□□□□ -0.93
CD46-208ENST00000367042 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 EPN1Q9Y6I3 576 aaPredicted RBP9.22□□□□□ -0.93
CD46-208ENST00000367042 SPATA31A3Q5VYP0 1347 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 FAM237AA0A1B0GTK4 181 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 RNF40O75150 1001 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 PPARDQ03181 441 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
CD46-208ENST00000367042 RASGRP2Q7LDG7 609 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 GSDMAQ96QA5 445 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 STK36Q9NRP7 1315 aa9.22□□□□□ -0.93
CD46-208ENST00000367042 WNT7AO00755 349 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 WHAMMP3Q1A5X7 153 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 CCDC70Q6NSX1 233 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 SRLQ86TD4 932 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 JAG2Q9Y219 1238 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 TACC3Q9Y6A5 838 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 PKD1L3Q7Z443 1732 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 LRRIQ3A6PVS8 624 aaPredicted RBP9.21□□□□□ -0.93
CD46-208ENST00000367042 RNF225M0QZC1 329 aaPredicted RBP9.21□□□□□ -0.93
CD46-208ENST00000367042 TULP2O00295 520 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 PDE8AO60658 829 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 IGHMBP2P38935 993 aaKnown RBP9.21□□□□□ -0.93
CD46-208ENST00000367042 DPYDQ12882 1025 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 MAP9Q49MG5 647 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 FAM47AQ5JRC9 791 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 DZIP3Q86Y13 1208 aaKnown RBP9.21□□□□□ -0.93
CD46-208ENST00000367042 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.93
CD46-208ENST00000367042 AFAP1L1Q8TED9 768 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 DEF6Q9H4E7 631 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 AATFQ9NY61 560 aaKnown RBP eCLIP9.21□□□□□ -0.934e-6■□□□□ 10.1
CD46-208ENST00000367042 L1RE1Q9UN81 338 aa9.21□□□□□ -0.93
CD46-208ENST00000367042 MAP3K15Q6ZN16 1313 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 MAGEB6P1A0A0J9YX57 407 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 CSF1RP07333 972 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 SPAG1Q07617 926 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 MUM1L1Q5H9M0 696 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms