RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 TROVE2P10155 538 aaKnown RBP eCLIP11.31□□□□□ -0.6
ATF3-206ENST00000366987 ALDH3A1P30838 453 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 BTG3Q14201 252 aaPredicted RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 VPS72Q15906 364 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 WHAMMP3Q1A5X7 153 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 LARP1Q6PKG0 1096 aaKnown RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 CCDC13Q8IYE1 715 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 CNKSR1Q969H4 720 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 JAKMIP1Q96N16 626 aaKnown RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 SH3GL1Q99961 368 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 TCHPQ9BT92 498 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 PICK1Q9NRD5 415 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 WDR35Q9P2L0 1181 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 LRRD1A4D1F6 860 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 STXBP3O00186 592 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 LINGO3P0C6S8 592 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 SCNN1BP51168 640 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 SULT6B1Q6IMI4 303 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 DZIP1LQ8IYY4 767 aaKnown RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 RASSF8Q8NHQ8 419 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 SMARCC2Q8TAQ2 1214 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 DDX12PQ92771 950 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 NACC2Q96BF6 587 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 OPTNQ96CV9 577 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 CAPS2Q9BXY5 557 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 MYO1AQ9UBC5 1043 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 TPX2Q9ULW0 747 aaKnown RBP11.31□□□□□ -0.6
ATF3-206ENST00000366987 ZNF148Q9UQR1 794 aa11.31□□□□□ -0.6
ATF3-206ENST00000366987 ATRNO75882 1429 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 UNCXA6NJT0 531 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 MSL3P1P0C860 447 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 ATP4AP20648 1035 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 GNAQP50148 359 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 E2F5Q15329 346 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 SGSM1Q2NKQ1 1148 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 ZNF772Q68DY9 489 aaPredicted RBP11.3□□□□□ -0.6
ATF3-206ENST00000366987 TRIM65Q6PJ69 517 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 SYCP3Q8IZU3 236 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 LRRC43Q8N309 656 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 WDR66Q8TBY9 1149 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 NSMCE1Q8WV22 266 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 IL17RAQ96F46 866 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 PPME1Q9Y570 386 aa11.3□□□□□ -0.6
ATF3-206ENST00000366987 PKD1L3Q7Z443 1732 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 SPATA31A1Q5TZJ5 1347 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 SPATA31A5Q5VU36 1347 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 SPATA31A7Q8IWB4 1347 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
ATF3-206ENST00000366987 GOLGA6L4A6NEF3 574 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 BECN2A8MW95 431 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 TBC1D12O60347 775 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 BUB1BO60566 1050 aaPredicted RBP11.29□□□□□ -0.6
ATF3-206ENST00000366987 HMOX1P09601 288 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 CCDC159P0C7I6 412 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 SKOR1P84550 965 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 XRCC4Q13426 336 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 ANO6Q4KMQ2 910 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 PACS1Q6VY07 963 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 SRGAP1Q7Z6B7 1085 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 FAM228AQ86W67 206 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 ANKRD13AQ8IZ07 590 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 CCDC155Q8N6L0 562 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 USP33Q8TEY7 942 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 PLEKHA4Q9H4M7 779 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
ATF3-206ENST00000366987 ATP6V0A2Q9Y487 856 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 ASB3Q9Y575 518 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 BZW2Q9Y6E2 419 aaKnown RBP11.29□□□□□ -0.6
ATF3-206ENST00000366987 KDM1AO60341 852 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 KIF4AO95239 1232 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 RPSAP08865 295 aaKnown RBP11.29□□□□□ -0.6
ATF3-206ENST00000366987 ZNF165P49910 485 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 NSUN2Q08J23 767 aaKnown RBP eCLIP11.29□□□□□ -0.6
ATF3-206ENST00000366987 CMPK2Q5EBM0 449 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 DZIP1Q86YF9 867 aaKnown RBP11.29□□□□□ -0.6
ATF3-206ENST00000366987 CEP57L1Q8IYX8 460 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 TCP11L2Q8N4U5 519 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 MIGA1Q8NAN2 632 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 MAIP1Q8WWC4 291 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 TRAPPC9Q96Q05 1148 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 CDCA7Q9BWT1 371 aaPredicted RBP11.29□□□□□ -0.6
ATF3-206ENST00000366987 CENPHQ9H3R5 247 aa11.29□□□□□ -0.6
ATF3-206ENST00000366987 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
ATF3-206ENST00000366987 PPP1R12BO60237 982 aaPredicted RBP11.28□□□□□ -0.6
ATF3-206ENST00000366987 N4BP1O75113 896 aaKnown RBP11.28□□□□□ -0.6
ATF3-206ENST00000366987 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms