RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
CSNK1E-202ENST00000366216 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
CSNK1E-202ENST00000366216 IL25Q9H293 177 aa13.39□□□□□ -0.27
CSNK1E-202ENST00000366216 CHD9Q3L8U1 2897 aa13.39□□□□□ -0.27
CSNK1E-202ENST00000366216 MYO5AQ9Y4I1 1855 aaKnown RBP13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 RGS2P41220 211 aa13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 ATN1P54259 1190 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 RTP1P59025 263 aa13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 NMIQ13287 307 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 PICALMQ13492 652 aa13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 Q3C1V9 767 aa13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 USP38Q8NB14 1042 aa13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 GPRC5AQ8NFJ5 357 aa13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 MYH1P12882 1939 aa13.38□□□□□ -0.27
CSNK1E-202ENST00000366216 GOLIM4O00461 696 aa13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 TBC1D12O60347 775 aa13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 ARID4AP29374 1257 aaPredicted RBP13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 MAPK4P31152 587 aa13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 HSPA4P34932 840 aa13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 LRRFIP1Q32MZ4 808 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 SH3D19Q5HYK7 790 aa13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 EDC3Q96F86 508 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 APBA2Q99767 749 aa13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 PORCNQ9H237 461 aa13.37□□□□□ -0.27
CSNK1E-202ENST00000366216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.276e-12■■■■■ 78.7
CSNK1E-202ENST00000366216 ZNF236Q9UL36 1845 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 DNM1LO00429 736 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 BTDP43251 543 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 MAP3K12Q12852 859 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 RASGRF1Q13972 1273 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 MORN1Q5T089 497 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 CCDC102BQ68D86 513 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 ERICH6Q7L0X2 663 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 HSCBQ8IWL3 235 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 BADQ92934 168 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 FAM227BQ96M60 508 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 FLRT1Q9NZU1 646 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
CSNK1E-202ENST00000366216 A0A0D9SFI3 127 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 USP17L5A8MUK1 530 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 ZFYP08048 801 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 SLC4A3P48751 1232 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 HERVK_113P62684 666 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 GPR142Q7Z601 462 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 CCAR1Q8IX12 1150 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 LPAR1Q92633 364 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 KCNB2Q92953 911 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 PRDM5Q9NQX1 630 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 HELLSQ9NRZ9 838 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 DDX20Q9UHI6 824 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 TRANK1O15050 2925 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 CCDC171Q6TFL3 1326 aa13.35□□□□□ -0.27
CSNK1E-202ENST00000366216 GPR75-ASB3A0A0A6YYF3 556 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 MSCO60682 206 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 HOXA7P31268 230 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 CAP2P40123 477 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 MCAMP43121 646 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 ZAP70P43403 619 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 ERVK-24P63145 666 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 MTMR2Q13614 643 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 MCMDC2Q4G0Z9 681 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 PLEKHH3Q7Z736 793 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 ZGPATQ8N5A5 531 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 AS3MTQ9HBK9 375 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 PIEZO1Q92508 2521 aa13.34□□□□□ -0.27
CSNK1E-202ENST00000366216 MYH7P12883 1935 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 SEMA3EO15041 775 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 RNF113AO15541 343 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 CNGA1P29973 690 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 PTH1RQ03431 593 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 MAP2K5Q13163 448 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 GRIN2CQ14957 1233 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 SLC39A5Q6ZMH5 540 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 DZIP1Q86YF9 867 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 TRPV1Q8NER1 839 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 ATXN2LQ8WWM7 1075 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 DNAJC18Q9H819 358 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 TMOD4Q9NZQ9 345 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 CHD7Q9P2D1 2997 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 MROH7-TTC4A0A0A0MT08 1334 aa13.33□□□□□ -0.28
CSNK1E-202ENST00000366216 ST18O60284 1047 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 CNMDO75829 334 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 IGHA2P01877 340 aa13.32□□□□□ -0.28
CSNK1E-202ENST00000366216 MECOMQ03112 1051 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms