RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 A0A0G2JMZ2 1700 aa16.42■□□□□ 0.22
TNFRSF1A-202ENST00000366159 ROBO3Q96MS0 1386 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 RPTORQ8N122 1335 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 M0R2C6 588 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 ERC2O15083 957 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 GPAA1O43292 621 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 GLRX3O76003 335 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 CYP2B6P20813 491 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 ICA1Q05084 483 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 COG2Q14746 738 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 LPAR1Q92633 364 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 DEFB118Q96PH6 123 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 VCPKMTQ9H867 229 aa16.41■□□□□ 0.22
TNFRSF1A-202ENST00000366159 PATL2C9JE40 543 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-202ENST00000366159 MX1P20591 662 aa16.4■□□□□ 0.22
TNFRSF1A-202ENST00000366159 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
TNFRSF1A-202ENST00000366159 SEC62Q99442 399 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-202ENST00000366159 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
TNFRSF1A-202ENST00000366159 ARHGEF10LQ9HCE6 1279 aa16.4■□□□□ 0.22
TNFRSF1A-202ENST00000366159 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
TNFRSF1A-202ENST00000366159 STAP2Q9UGK3 403 aa16.4■□□□□ 0.22
TNFRSF1A-202ENST00000366159 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 IGHA2P01877 340 aa16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 EEF2P13639 858 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 GNAT2P19087 354 aa16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 RASA1P20936 1047 aa16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 CCNA1P78396 465 aa16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 AAMPQ13685 434 aa16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 TRMT44Q8IYL2 757 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 HMX1Q9NP08 348 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 ADAMTS5Q9UNA0 930 aa16.39■□□□□ 0.21
TNFRSF1A-202ENST00000366159 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 FARP2O94887 1054 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 TFRCP02786 760 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 HOXC6P09630 235 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 PTPREP23469 700 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 DSG3P32926 999 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 RGS2P41220 211 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 MNX1P50219 401 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 MAP2K5Q13163 448 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 GRB14Q14449 540 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 CCL14Q16627 93 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 ZMYM1Q5SVZ6 1142 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 SH2D4AQ9H788 454 aa16.38■□□□□ 0.21
TNFRSF1A-202ENST00000366159 RANBP2P49792 3224 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 CEP290O15078 2479 aa16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 IGKV6D-41A0A0C4DH26 115 aa16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 WDR46O15213 610 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 CACNB2Q08289 660 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 IFNL3Q8IZI9 196 aa16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 SPICE1Q8N0Z3 855 aa16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 APBA2Q99767 749 aa16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 MOV10L1Q9BXT6 1211 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 TANGO6Q9C0B7 1094 aa16.37■□□□□ 0.21
TNFRSF1A-202ENST00000366159 H0YGN5 161 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 FOXP2O15409 715 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 MB21D1Q8N884 522 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 ANKLE1Q8NAG6 615 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 SHCBP1Q8NEM2 672 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 SPATC1LQ9H0A9 340 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 FLRT1Q9NZU1 646 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 OGDHLQ9ULD0 1010 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 ZNF236Q9UL36 1845 aa16.36■□□□□ 0.21
TNFRSF1A-202ENST00000366159 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 ZKSCAN1P17029 563 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 PDE1AP54750 535 aa16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 HABP4Q5JVS0 413 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 LHX8Q68G74 356 aa16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 SMC5Q8IY18 1101 aa16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 ATG4CQ96DT6 458 aa16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 HTATIP2Q9BUP3 242 aa16.35■□□□□ 0.21
TNFRSF1A-202ENST00000366159 STRNO43815 780 aa16.34■□□□□ 0.21
TNFRSF1A-202ENST00000366159 FLOT1O75955 427 aa16.34■□□□□ 0.21
TNFRSF1A-202ENST00000366159 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-202ENST00000366159 NPLOC4Q8TAT6 608 aa16.34■□□□□ 0.21
TNFRSF1A-202ENST00000366159 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-202ENST00000366159 MKL1Q969V6 931 aa16.34■□□□□ 0.21
TNFRSF1A-202ENST00000366159 PAWRQ96IZ0 340 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-202ENST00000366159 MKNK2Q9HBH9 465 aa16.34■□□□□ 0.21
TNFRSF1A-202ENST00000366159 ERCC3P19447 782 aa16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 CCND3P30281 292 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 TDO2P48775 406 aa16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 TMEM132BQ14DG7 1078 aa16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 REPS2Q8NFH8 660 aa16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 DPF3Q92784 378 aa16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 FBXO28Q9NVF7 368 aa16.33■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ALPK3Q96L96 1907 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 IGHDP01880 384 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 APPP05067 770 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms