RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 TBC1D8BQ0IIM8 1120 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 MAP4K2Q12851 820 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 MMRN1Q13201 1228 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 HDAC1Q13547 482 aaPredicted RBP5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 MTMR1Q13613 665 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 HEATR6Q6AI08 1181 aaKnown RBP5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 GDF6Q6KF10 455 aaPredicted RBP5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 C12orf40Q86WS4 652 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 SPATS2Q86XZ4 545 aaKnown RBP5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 MYO1HQ8N1T3 1032 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 IL22RA1Q8N6P7 574 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 KCT2Q8NC54 265 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 RNF214Q8ND24 703 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 FAM13CQ8NE31 585 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 BVESQ8NE79 360 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 SLC7A14Q8TBB6 771 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 ZNF507Q8TCN5 953 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 CHMP4CQ96CF2 233 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 CCDC140Q96MF4 163 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 SPOCK3Q9BQ16 436 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 WDR18Q9BV38 432 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 SENP2Q9HC62 589 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 PRDM6Q9NQX0 595 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 KLHL3Q9UH77 587 aa5.19□□□□□ -1.58
RNVU1-3-201ENST00000364313 LOC100289279A0A1B0GTE1 492 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 C9IYK1 514 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 CLEC3AO75596 197 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 SCGB1D2O95969 90 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 APBA3O96018 575 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 BPIP17213 487 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 POLR2BP30876 1174 aaKnown RBP5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 ETF1P62495 437 aaKnown RBP5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 PIN1Q13526 163 aaPredicted RBP5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 FAM50AQ14320 339 aaKnown RBP5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 STAT4Q14765 748 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 LONRF3Q496Y0 759 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 AXDND1Q5T1B0 1012 aaPredicted RBP5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 CNNM4Q6P4Q7 775 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 POMZP3Q6PJE2 187 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 SV2AQ7L0J3 742 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 MAMDC2Q7Z304 686 aaPredicted RBP5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 CHPFQ8IZ52 775 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 ARHGEF39Q8N4T4 335 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 CRACR2BQ8N4Y2 399 aaPredicted RBP5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 LRRN4CLQ8ND94 238 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 TTC8Q8TAM2 541 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 CYB5D2Q8WUJ1 264 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 PTPRN2Q92932 1015 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 VWCEQ96DN2 955 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 KLHDC7BQ96G42 594 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 MENTQ9BUN1 341 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 GBP3Q9H0R5 595 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 TCF7L1Q9HCS4 588 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 PRR13Q9NZ81 148 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 CRIM1Q9NZV1 1036 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 WHRNQ9P202 907 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 EMC9Q9Y3B6 208 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 STARD13Q9Y3M8 1113 aa5.18□□□□□ -1.58
RNVU1-3-201ENST00000364313 PRAMEF27A3QJZ7 478 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 MEGF11A6BM72 1044 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 B4E1Z4 1266 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 LINC01387J3KSC0 135 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 PRODHO43272 600 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 PLIN1O60240 522 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 KATNA1O75449 491 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 PPM1BO75688 479 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 CST3P01034 146 aaPredicted RBP5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 SCG5P05408 212 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 KRT18P05783 430 aaKnown RBP5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 MYL1P05976 194 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 MX2P20592 715 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 ALAS2P22557 587 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 IGFALSP35858 605 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 ID3Q02535 119 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 PDE3AQ14432 1141 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 PCBP1Q15365 356 aaKnown RBP eCLIP5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 PKDCCQ504Y2 493 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 EXOSC6Q5RKV6 272 aaKnown RBP5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 FAM102BQ5T8I3 360 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 PKN3Q6P5Z2 889 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 BRAPQ7Z569 592 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 PASD1Q8IV76 773 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 TRIM59Q8IWR1 403 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 DCAF11Q8TEB1 546 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 LEO1Q8WVC0 666 aaPredicted RBP5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 SLC7A3Q8WY07 619 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 TRIM47Q96LD4 638 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 GSX1Q9H4S2 264 aaPredicted RBP5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 SLC52A2Q9HAB3 445 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 AAASQ9NRG9 546 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 LRRC4BQ9NT99 713 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 ZIM2Q9NZV7 527 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 LRP2BPQ9P2M1 347 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 APEX2Q9UBZ4 518 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 COMMD10Q9Y6G5 202 aa5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 COL17A1Q9UMD9 1497 aaPredicted RBP5.17□□□□□ -1.58
RNVU1-3-201ENST00000364313 NOP56O00567 594 aaKnown RBP5.16□□□□□ -1.58
RNVU1-3-201ENST00000364313 NRG2O14511 850 aaPredicted RBP5.16□□□□□ -1.58
RNVU1-3-201ENST00000364313 SHOXO15266 292 aa5.16□□□□□ -1.58
RNVU1-3-201ENST00000364313 TMPRSS2O15393 492 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms