RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CFAP100Q494V2 611 aa14.18□□□□□ -0.14
UBA3-202ENST00000361055 SPTY2D1Q68D10 685 aaPredicted RBP14.18□□□□□ -0.14
UBA3-202ENST00000361055 HOMER1Q86YM7 354 aa14.18□□□□□ -0.14
UBA3-202ENST00000361055 NOSTRINQ8IVI9 506 aa14.18□□□□□ -0.14
UBA3-202ENST00000361055 TBC1D22AQ8WUA7 517 aa14.18□□□□□ -0.14
UBA3-202ENST00000361055 SRRTQ9BXP5 876 aaKnown RBP14.18□□□□□ -0.14
UBA3-202ENST00000361055 KRT23Q9C075 422 aa14.18□□□□□ -0.14
UBA3-202ENST00000361055 DBNDD1Q9H9R9 158 aa14.18□□□□□ -0.14
UBA3-202ENST00000361055 NID2Q14112 1375 aa14.18□□□□□ -0.14
UBA3-202ENST00000361055 SCN9AQ15858 1988 aa14.18□□□□□ -0.14
UBA3-202ENST00000361055 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
UBA3-202ENST00000361055 ECE2O60344 883 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
UBA3-202ENST00000361055 H2AFXP16104 143 aaPredicted RBP14.17□□□□□ -0.14
UBA3-202ENST00000361055 SAFBQ15424 915 aaKnown RBP eCLIP14.17□□□□□ -0.14
UBA3-202ENST00000361055 NT5DC1Q5TFE4 455 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 TRIM65Q6PJ69 517 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 TMTC2Q8N394 836 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 ZNF579Q8NAF0 562 aaKnown RBP14.17□□□□□ -0.14
UBA3-202ENST00000361055 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
UBA3-202ENST00000361055 FANCLQ9NW38 375 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.17□□□□□ -0.14
UBA3-202ENST00000361055 ZHX1Q9UKY1 873 aaPredicted RBP14.17□□□□□ -0.14
UBA3-202ENST00000361055 JAG2Q9Y219 1238 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 V9GYY5 206 aaPredicted RBP14.17□□□□□ -0.14
UBA3-202ENST00000361055 PSME4Q14997 1843 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 LTBP3Q9NS15 1303 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 ZSCAN12O43309 604 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 PTPREP23469 700 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 GTF2IP78347 998 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 AKNAD1Q5T1N1 836 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 REXO1L1PQ8IX06 675 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 MLKLQ8NB16 471 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 SLC26A6Q9BXS9 759 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
UBA3-202ENST00000361055 RAI14Q9P0K7 980 aa14.17□□□□□ -0.14
UBA3-202ENST00000361055 NFKBIEO00221 500 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 MMP1P03956 469 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 SARSP49591 514 aaKnown RBP14.16□□□□□ -0.14
UBA3-202ENST00000361055 FAM193AP78312 1265 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 TBX2Q13207 712 aaPredicted RBP14.16□□□□□ -0.14
UBA3-202ENST00000361055 BMS1Q14692 1282 aaKnown RBP14.16□□□□□ -0.14
UBA3-202ENST00000361055 RILPL1Q5EBL4 403 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 TMED8Q6PL24 325 aaPredicted RBP14.16□□□□□ -0.14
UBA3-202ENST00000361055 LARGE2Q8N3Y3 721 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 MAGEB6Q8N7X4 407 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 NAPBQ9H115 298 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 ZNF646O15015 1829 aaPredicted RBP14.16□□□□□ -0.14
UBA3-202ENST00000361055 ARHGAP6O43182 974 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 SLFN14P0C7P3 912 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 GNAT2P19087 354 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 PRDX5P30044 214 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 TOB1P50616 345 aaPredicted RBP14.16□□□□□ -0.14
UBA3-202ENST00000361055 RCAN1P53805 252 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 ERCC6LQ2NKX8 1250 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 MFSD14BQ5SR56 506 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 KANK3Q6NY19 840 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 STK11IPQ8N1F8 1099 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 TRIML1Q8N9V2 468 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 ENOX1Q8TC92 643 aaKnown RBP14.16□□□□□ -0.14
UBA3-202ENST00000361055 DACH1Q9UI36 760 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 DNAI1Q9UI46 699 aa14.16□□□□□ -0.14
UBA3-202ENST00000361055 CCDC196A0A1B0GTZ2 297 aa14.15□□□□□ -0.14
UBA3-202ENST00000361055 GSG1L2A8MUP6 293 aa14.15□□□□□ -0.14
UBA3-202ENST00000361055 BTBD18B2RXH4 712 aa14.15□□□□□ -0.14
UBA3-202ENST00000361055 LDHBP07195 334 aaKnown RBP14.15□□□□□ -0.14
UBA3-202ENST00000361055 BMP6P22004 513 aa14.15□□□□□ -0.14
UBA3-202ENST00000361055 STRIP1Q5VSL9 837 aa14.15□□□□□ -0.14
UBA3-202ENST00000361055 MFSD6Q6ZSS7 791 aa14.15□□□□□ -0.14
UBA3-202ENST00000361055 TRIM22Q8IYM9 498 aa14.15□□□□□ -0.14
UBA3-202ENST00000361055 INCENPQ9NQS7 918 aa14.15□□□□□ -0.14
UBA3-202ENST00000361055 GOLGA6L9A6NEM1 432 aa14.15□□□□□ -0.15
UBA3-202ENST00000361055 TPM1P09493 284 aa14.15□□□□□ -0.15
UBA3-202ENST00000361055 PDE4BQ07343 736 aa14.15□□□□□ -0.15
UBA3-202ENST00000361055 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.15
UBA3-202ENST00000361055 CT47A1Q5JQC4 288 aaPredicted RBP14.15□□□□□ -0.15
UBA3-202ENST00000361055 STAG1Q8WVM7 1258 aa14.15□□□□□ -0.15
UBA3-202ENST00000361055 NSUN4Q96CB9 384 aaKnown RBP14.15□□□□□ -0.15
UBA3-202ENST00000361055 MYL10Q9BUA6 226 aa14.15□□□□□ -0.15
UBA3-202ENST00000361055 EPB41L4AQ9HCS5 686 aaPredicted RBP14.15□□□□□ -0.15
UBA3-202ENST00000361055 FBXO2Q9UK22 296 aaPredicted RBP14.15□□□□□ -0.15
UBA3-202ENST00000361055 MAN1B1Q9UKM7 699 aa14.15□□□□□ -0.15
UBA3-202ENST00000361055 SUGT1Q9Y2Z0 365 aa14.15□□□□□ -0.15
UBA3-202ENST00000361055 MYH2Q9UKX2 1941 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 STX10O60499 249 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 FKBP1AP62942 108 aaKnown RBP14.14□□□□□ -0.15
UBA3-202ENST00000361055 MECOMQ03112 1051 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 CTDSPL2Q05D32 466 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 POSTNQ15063 836 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 DZIP1Q86YF9 867 aaKnown RBP14.14□□□□□ -0.15
UBA3-202ENST00000361055 TMEM139Q8IV31 216 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 DIS3L2Q8IYB7 885 aaKnown RBP14.14□□□□□ -0.15
UBA3-202ENST00000361055 CRACR2BQ8N4Y2 399 aaPredicted RBP14.14□□□□□ -0.15
UBA3-202ENST00000361055 NACAP1Q9BZK3 213 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 ZNF446Q9NWS9 450 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 CEP131Q9UPN4 1083 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 SRPRBQ9Y5M8 271 aaKnown RBP14.14□□□□□ -0.15
UBA3-202ENST00000361055 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 COL4A5P29400 1685 aa14.14□□□□□ -0.15
UBA3-202ENST00000361055 USP17L3A6NCW0 530 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms