RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 CATIPQ7Z7H3 387 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 PNKPQ96T60 521 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 NUP88Q99567 741 aaPredicted RBP23.52■■□□□ 1.36
TRIM3-202ENST00000359518 KRT31Q15323 416 aa23.51■■□□□ 1.35
TRIM3-202ENST00000359518 CDKAL1Q5VV42 579 aa23.51■■□□□ 1.35
TRIM3-202ENST00000359518 LRP6O75581 1613 aa23.51■■□□□ 1.35
TRIM3-202ENST00000359518 SLF1Q9BQI6 1058 aa23.51■■□□□ 1.35
TRIM3-202ENST00000359518 SH3RF1Q7Z6J0 888 aa23.51■■□□□ 1.35
TRIM3-202ENST00000359518 ANKZF1Q9H8Y5 726 aa23.51■■□□□ 1.35
TRIM3-202ENST00000359518 RNF216Q9NWF9 866 aaPredicted RBP23.51■■□□□ 1.35
TRIM3-202ENST00000359518 CDC23Q9UJX2 597 aa23.51■■□□□ 1.35
TRIM3-202ENST00000359518 XDHP47989 1333 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 PBX1P40424 430 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 DCCP43146 1447 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 ERVK-24P63145 666 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 EEF2KMTQ96G04 330 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 SLAIN2Q9P270 581 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 FUT2Q10981 343 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 FAM47AQ5JRC9 791 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 GSDMAQ96QA5 445 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 UBXN6Q9BZV1 441 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 MYH3P11055 1940 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 MYH2Q9UKX2 1941 aa23.5■■□□□ 1.35
TRIM3-202ENST00000359518 MTRQ99707 1265 aa23.49■■□□□ 1.35
TRIM3-202ENST00000359518 PDE11AQ9HCR9 933 aa23.49■■□□□ 1.35
TRIM3-202ENST00000359518 TRIM10Q9UDY6 481 aa23.49■■□□□ 1.35
TRIM3-202ENST00000359518 TFR2Q9UP52 801 aa23.49■■□□□ 1.35
TRIM3-202ENST00000359518 CTAGE9A4FU28 777 aa23.49■■□□□ 1.35
TRIM3-202ENST00000359518 ZFP91Q96JP5 570 aaPredicted RBP23.49■■□□□ 1.35
TRIM3-202ENST00000359518 CTAGE1Q96RT6 745 aa23.49■■□□□ 1.35
TRIM3-202ENST00000359518 GDAQ9Y2T3 454 aa23.49■■□□□ 1.35
TRIM3-202ENST00000359518 NID2Q14112 1375 aa23.49■■□□□ 1.35
TRIM3-202ENST00000359518 RTL9Q8NET4 1388 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 ATP8B1O43520 1251 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 IL6STP40189 918 aaPredicted RBP23.48■■□□□ 1.35
TRIM3-202ENST00000359518 LMAN1P49257 510 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 JAKMIP3Q5VZ66 844 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 RASGRP2Q7LDG7 609 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 BRMS1Q9HCU9 246 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 MYH6P13533 1939 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 CCDC151A5D8V7 595 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 ERVV-1B6SEH8 477 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 IRX5P78411 483 aaPredicted RBP23.48■■□□□ 1.35
TRIM3-202ENST00000359518 IQCA1Q86XH1 822 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 CNGA4Q8IV77 575 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 FERMT2Q96AC1 680 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 PLIN2Q99541 437 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 MTMR7Q9Y216 660 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 NIP7Q9Y221 180 aaKnown RBP eCLIP23.48■■□□□ 1.35
TRIM3-202ENST00000359518 MYH8P13535 1937 aa23.48■■□□□ 1.35
TRIM3-202ENST00000359518 SHANK3Q9BYB0 1731 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 USP17L12C9JPN9 530 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 USP17L21D6R901 530 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 PRPF3O43395 683 aaKnown RBP23.47■■□□□ 1.35
TRIM3-202ENST00000359518 NLRP5P59047 1200 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 TROAPQ12815 778 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 NPY5RQ15761 445 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 CCDC152Q4G0S7 254 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 BBXQ8WY36 941 aaPredicted RBP23.47■■□□□ 1.35
TRIM3-202ENST00000359518 CHP1Q99653 195 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 N4BP1O75113 896 aaKnown RBP23.47■■□□□ 1.35
TRIM3-202ENST00000359518 SRBD1Q8N5C6 995 aaKnown RBP23.47■■□□□ 1.35
TRIM3-202ENST00000359518 NAA15Q9BXJ9 866 aaKnown RBP23.47■■□□□ 1.35
TRIM3-202ENST00000359518 ABCB6Q9NP58 842 aa23.47■■□□□ 1.35
TRIM3-202ENST00000359518 KRT9P35527 623 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 MAPK8IP2Q13387 824 aaPredicted RBP23.46■■□□□ 1.35
TRIM3-202ENST00000359518 IL17AQ16552 155 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 ADAM21Q9UKJ8 722 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 NCAPH2Q6IBW4 605 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 IQUBQ8NA54 791 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 NELFBQ8WX92 580 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 JAG2Q9Y219 1238 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 SLIT2O94813 1529 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 TRIM49BA6NDI0 452 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 PHACTR2O75167 634 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 RASGRP4Q8TDF6 673 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 ABHD10Q9NUJ1 306 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 VPS18Q9P253 973 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 GUCA1BQ9UMX6 200 aa23.46■■□□□ 1.35
TRIM3-202ENST00000359518 NUP98P52948 1817 aa23.45■■□□□ 1.35
TRIM3-202ENST00000359518 COPB1P53618 953 aaKnown RBP23.45■■□□□ 1.34
TRIM3-202ENST00000359518 ACSBG1Q96GR2 724 aa23.45■■□□□ 1.34
TRIM3-202ENST00000359518 ENC1O14682 589 aa23.45■■□□□ 1.34
TRIM3-202ENST00000359518 UBXN1Q04323 297 aa23.45■■□□□ 1.34
TRIM3-202ENST00000359518 CEP112Q8N8E3 955 aa23.45■■□□□ 1.34
TRIM3-202ENST00000359518 NOA1Q8NC60 698 aaKnown RBP23.45■■□□□ 1.34
TRIM3-202ENST00000359518 RIOK1Q9BRS2 568 aaKnown RBP23.45■■□□□ 1.34
TRIM3-202ENST00000359518 VSNL1P62760 191 aa23.44■■□□□ 1.34
TRIM3-202ENST00000359518 PAK1Q13153 545 aa23.44■■□□□ 1.34
TRIM3-202ENST00000359518 BEND6Q5SZJ8 279 aaPredicted RBP23.44■■□□□ 1.34
TRIM3-202ENST00000359518 RASSF8Q8NHQ8 419 aa23.44■■□□□ 1.34
TRIM3-202ENST00000359518 KCNJ18B7U540 433 aa23.44■■□□□ 1.34
TRIM3-202ENST00000359518 FAM193AP78312 1265 aa23.44■■□□□ 1.34
TRIM3-202ENST00000359518 GPS2Q13227 327 aa23.44■■□□□ 1.34
TRIM3-202ENST00000359518 KCNJ12Q14500 433 aa23.44■■□□□ 1.34
TRIM3-202ENST00000359518 BRD3Q15059 726 aa23.44■■□□□ 1.34
TRIM3-202ENST00000359518 ATP2C1P98194 919 aaPredicted RBP23.43■■□□□ 1.34
TRIM3-202ENST00000359518 TMTC3Q6ZXV5 915 aa23.43■■□□□ 1.34
TRIM3-202ENST00000359518 NAPGQ99747 312 aaPredicted RBP23.43■■□□□ 1.34
TRIM3-202ENST00000359518 BCL9O00512 1426 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms