RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 UBE4AQ14139 1066 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 INF2Q27J81 1249 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 MAP9Q49MG5 647 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 CEP112Q8N8E3 955 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
COL20A1-201ENST00000358894 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
COL20A1-201ENST00000358894 PLEKHA8P1O95397 391 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 GUCY1A2P33402 732 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 TAF4BQ92750 862 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 HLA-DOAP06340 250 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 NEK11Q8NG66 645 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 GSG1L2A8MUP6 293 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 TMEM232C9JQI7 657 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 ZSCAN20P17040 1043 aaPredicted RBP13.78□□□□□ -0.2
COL20A1-201ENST00000358894 PLCD1P51178 756 aa13.78□□□□□ -0.2
COL20A1-201ENST00000358894 MACROD2A1Z1Q3 448 aa13.77□□□□□ -0.2
COL20A1-201ENST00000358894 CHMP4BP1P59074 171 aa13.77□□□□□ -0.2
COL20A1-201ENST00000358894 NCBP1Q09161 790 aaKnown RBP13.77□□□□□ -0.2
COL20A1-201ENST00000358894 WDR66Q8TBY9 1149 aa13.77□□□□□ -0.2
COL20A1-201ENST00000358894 ZNF622Q969S3 477 aaKnown RBP eCLIP13.77□□□□□ -0.2
COL20A1-201ENST00000358894 MON2Q7Z3U7 1717 aa13.77□□□□□ -0.2
COL20A1-201ENST00000358894 CDHR2Q9BYE9 1310 aa13.77□□□□□ -0.21
COL20A1-201ENST00000358894 UBAP1LF5GYI3 381 aa13.77□□□□□ -0.21
COL20A1-201ENST00000358894 KRT86O43790 486 aa13.77□□□□□ -0.21
COL20A1-201ENST00000358894 KIF5AQ12840 1032 aa13.77□□□□□ -0.21
COL20A1-201ENST00000358894 BLIDQ8IZY5 108 aa13.77□□□□□ -0.21
COL20A1-201ENST00000358894 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
COL20A1-201ENST00000358894 TTC31Q49AM3 519 aaPredicted RBP13.77□□□□□ -0.21
COL20A1-201ENST00000358894 TICAM2Q86XR7 235 aa13.77□□□□□ -0.21
COL20A1-201ENST00000358894 MICALL1Q8N3F8 863 aa13.77□□□□□ -0.21
COL20A1-201ENST00000358894 ARPP21Q9UBL0 812 aaPredicted RBP13.77□□□□□ -0.21
COL20A1-201ENST00000358894 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 DYMQ7RTS9 669 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 TRIML1Q8N9V2 468 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 ALS2CR12Q96Q35 445 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 NOC4LQ9BVI4 516 aaKnown RBP13.76□□□□□ -0.21
COL20A1-201ENST00000358894 VPS18Q9P253 973 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 UBE2Q2LH0YL09 131 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 RESP18Q5W5W9 173 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 CSF1RP07333 972 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 CASP7P55210 303 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
COL20A1-201ENST00000358894 BICDL2A1A5D9 508 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 PLCG2P16885 1265 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 KRT83P78385 493 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 ZNF526Q8TF50 670 aaPredicted RBP13.75□□□□□ -0.21
COL20A1-201ENST00000358894 FAM107BQ9H098 131 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 TOM1O60784 492 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 PTPREP23469 700 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 NOP2P46087 812 aaKnown RBP13.75□□□□□ -0.21
COL20A1-201ENST00000358894 NONOQ15233 471 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL20A1-201ENST00000358894 ZFYVE27Q5T4F4 411 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 CYP26C1Q6V0L0 522 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 VSTM4Q8IW00 320 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 KNDC1Q76NI1 1749 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 PEAK1Q9H792 1746 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 ARHGAP23Q9P227 1491 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 CLGNO14967 610 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 USP17L8P0C7I0 530 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 CASP14P31944 242 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 MORC3Q14149 939 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 SYCP1Q15431 976 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 RNF187Q5TA31 235 aaPredicted RBP13.75□□□□□ -0.21
COL20A1-201ENST00000358894 NAPGQ99747 312 aaPredicted RBP13.75□□□□□ -0.21
COL20A1-201ENST00000358894 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
COL20A1-201ENST00000358894 SRPRBQ9Y5M8 271 aaKnown RBP13.75□□□□□ -0.21
COL20A1-201ENST00000358894 NMT2O60551 498 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 TMTC1Q8IUR5 882 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 STAG1Q8WVM7 1258 aa13.75□□□□□ -0.21
COL20A1-201ENST00000358894 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
COL20A1-201ENST00000358894 SLIT1O75093 1534 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 ZNF804BA4D1E1 1349 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 KCNJ18B7U540 433 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 STX10O60499 249 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 SLFN14P0C7P3 912 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 KCNJ12Q14500 433 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 ENGASEQ8NFI3 743 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 DPF2Q92785 391 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 SPAG5Q96R06 1193 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 RABEP2Q9H5N1 569 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 TMOD2Q9NZR1 351 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 UBR1Q8IWV7 1749 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 CYP2D6P10635 497 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 PRDX5P30044 214 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 DIXDC1Q155Q3 683 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 SV2BQ7L1I2 683 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 CABP7Q86V35 215 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 DYNLL2Q96FJ2 89 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 EYA3Q99504 573 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 KLRF2D3W0D1 207 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 IGDCC4Q8TDY8 1250 aa13.74□□□□□ -0.21
COL20A1-201ENST00000358894 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms