RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 AGLP35573 1532 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 PIK3C2AO00443 1686 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 KRT86O43790 486 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 GYG1P46976 350 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 TOB1P50616 345 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-203ENST00000358528 ASIC1P78348 528 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 CCDC24Q8N4L8 307 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 NOA1Q8NC60 698 aaKnown RBP7.4□□□□□ -1.23
CSDE1-203ENST00000358528 GPKOWQ92917 476 aaPredicted RBP eCLIP7.4□□□□□ -1.231e-7■□□□□ 10.5
CSDE1-203ENST00000358528 JAKMIP2Q96AA8 810 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 MAP3K14Q99558 947 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 CHP1Q99653 195 aa7.4□□□□□ -1.23
CSDE1-203ENST00000358528 TEX13AQ9BXU3 409 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-203ENST00000358528 ZRANB2O95218 330 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CD44P16070 742 aaKnown RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 ERCC5P28715 1186 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 KCNJ6P48051 423 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 GTF2A1P52655 376 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CUL4BQ13620 913 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 TTC31Q49AM3 519 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CACNA2D4Q7Z3S7 1137 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CCDC42Q96M95 316 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 FOXP1Q9H334 677 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 MKNK2Q9HBH9 465 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 POLD4Q9HCU8 107 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 FMN2Q9NZ56 1722 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 PSMA7O14818 248 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 ATP8B1O43520 1251 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 PDE8AO60658 829 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 RNF40O75150 1001 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CYLC1P35663 651 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 USP5P45974 858 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 DYNLL1P63167 89 aaKnown RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 KIF5AQ12840 1032 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 SND1Q7KZF4 910 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 TRIML1Q8N9V2 468 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 LCMT1Q9UIC8 334 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 SAR1BQ9Y6B6 198 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 SOS2Q07890 1332 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 KDM6AO15550 1401 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 ABL1P00519 1130 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CXCR5P32302 372 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CAVIN4Q5BKX8 364 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CSGALNACT2Q8N6G5 542 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 IFT81Q8WYA0 676 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 EXOC4Q96A65 974 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 PANX2Q96RD6 677 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 NAA15Q9BXJ9 866 aaKnown RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 HSD3B7Q9H2F3 369 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 EPB41L4AQ9HCS5 686 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 FEZ2Q9UHY8 353 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-203ENST00000358528 ZBTB1Q9Y2K1 713 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 CPDO75976 1380 aa7.39□□□□□ -1.23
CSDE1-203ENST00000358528 SHTN1A0MZ66 631 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 B4DLN1 442 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 USP17L12C9JPN9 530 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 USP17L21D6R901 530 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 SMIM22K7EJ46 135 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 USO1O60763 962 aaKnown RBP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 EPS15P42566 896 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 NR1I3Q14994 352 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 PTPROQ16827 1216 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 RNF187Q5TA31 235 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 OR8K1Q8NGG5 319 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 KAT14Q9H8E8 782 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 RMND1Q9NWS8 449 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 BCCIPQ9P287 314 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 NIP7Q9Y221 180 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 FANCGO15287 622 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 NMT2O60551 498 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 KIAA0754O94854 1291 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 LIFRP42702 1097 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 PAFAH1B1P43034 410 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 ATP2B2Q01814 1243 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 DTHD1Q6ZMT9 781 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 NLRP10Q86W26 655 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 AMOTL1Q8IY63 956 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 FAM207AQ9NSI2 230 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 EXOC1Q9NV70 894 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 AATFQ9NY61 560 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.38□□□□□ -1.231e-11■■□□□ 14.1
CSDE1-203ENST00000358528 RTL9Q8NET4 1388 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 GSG1L2A8MUP6 293 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 FOXP2O15409 715 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 KRT83P78385 493 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 SETQ01105 290 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 PDE4DQ08499 809 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 C2orf54Q08AI8 447 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 SF3A3Q12874 501 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 HLTFQ14527 1009 aaKnown RBP eCLIP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 WHAMMP3Q1A5X7 153 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 IQCEQ6IPM2 695 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 TYW1BQ6NUM6 668 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 FAM76AQ8TAV0 307 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 NOC4LQ9BVI4 516 aaKnown RBP7.38□□□□□ -1.23
CSDE1-203ENST00000358528 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
CSDE1-203ENST00000358528 ATG3Q9NT62 314 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms