RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 CABP5Q9NP86 173 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 LRP2BPQ9P2M1 347 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 ZMYM6O95789 1325 aa12.8□□□□□ -0.36
CNOT3-202ENST00000358389 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 HOXC9P31274 260 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 PTPAQ15257 358 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 KRT31Q15323 416 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 OR8K1Q8NGG5 319 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 HDAC7Q8WUI4 952 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 RSRC1Q96IZ7 334 aaKnown RBP12.79□□□□□ -0.36
CNOT3-202ENST00000358389 SMARCAL1Q9NZC9 954 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 MAGEC2Q9UBF1 373 aaPredicted RBP12.79□□□□□ -0.36
CNOT3-202ENST00000358389 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.79□□□□□ -0.36
CNOT3-202ENST00000358389 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
CNOT3-202ENST00000358389 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 CCDC13Q8IYE1 715 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 CMTR1Q8N1G2 835 aaKnown RBP12.79□□□□□ -0.36
CNOT3-202ENST00000358389 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
CNOT3-202ENST00000358389 PLCD4Q9BRC7 762 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 UBAC1Q9BSL1 405 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 DMGDHQ9UI17 866 aaKnown RBP12.79□□□□□ -0.36
CNOT3-202ENST00000358389 TNRQ92752 1358 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 FRMPD1Q5SYB0 1578 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 TMEM67Q5HYA8 995 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 ZMYM1Q5SVZ6 1142 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 NAA35Q5VZE5 725 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 C8orf74Q6P047 294 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
CNOT3-202ENST00000358389 B4E1Z4 1266 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 COPB1P53618 953 aaKnown RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 TTF1Q15361 905 aaPredicted RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 CSRNP2Q9H175 543 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 SLC12A7Q9Y666 1083 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 BUB1BO60566 1050 aaPredicted RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 SHOX2O60902 331 aaPredicted RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 LSP1P33241 339 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 HDLBPQ00341 1268 aaKnown RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 GCKRQ14397 625 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 PNMA8AQ86V59 439 aaPredicted RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 SPATS2Q86XZ4 545 aaKnown RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 TRIML1Q8N9V2 468 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 ZNF473Q8WTR7 871 aaKnown RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 RNPC3Q96LT9 517 aaKnown RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 HAUS2Q9NVX0 235 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 ANGEL1Q9UNK9 670 aaKnown RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 LMTK2Q8IWU2 1503 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 PTPN12Q05209 780 aaKnown RBP12.78□□□□□ -0.36
CNOT3-202ENST00000358389 PARP9Q8IXQ6 854 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
CNOT3-202ENST00000358389 ESYT3A0FGR9 886 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 IFIT3O14879 490 aaKnown RBP12.77□□□□□ -0.36
CNOT3-202ENST00000358389 NR1D1P20393 614 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 AMPD2Q01433 879 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 NR5A1Q13285 461 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 EPSTI1Q96J88 318 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 CCT8L2Q96SF2 557 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 CEP131Q9UPN4 1083 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 SH3TC1Q8TE82 1336 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 TARSL2A2RTX5 802 aaKnown RBP12.77□□□□□ -0.36
CNOT3-202ENST00000358389 RNF225M0QZC1 329 aaPredicted RBP12.77□□□□□ -0.36
CNOT3-202ENST00000358389 TACC1O75410 805 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 IGKV5-2P06315 115 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 HOXB7P09629 217 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.36
CNOT3-202ENST00000358389 IKQ13123 557 aaPredicted RBP12.77□□□□□ -0.36
CNOT3-202ENST00000358389 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.36
CNOT3-202ENST00000358389 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.36
CNOT3-202ENST00000358389 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 A6NNZ2 444 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 PDE2AO00408 941 aaPredicted RBP12.77□□□□□ -0.37
CNOT3-202ENST00000358389 USO1O60763 962 aaKnown RBP12.77□□□□□ -0.37
CNOT3-202ENST00000358389 METP08581 1390 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 KCNJ12Q14500 433 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 TUBB8Q3ZCM7 444 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 NLRP14Q86W24 1093 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 SEC31BQ9NQW1 1179 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 NEURL1BA8MQ27 555 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 SPAG1Q07617 926 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 ANKRD13CQ8N6S4 541 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 STAG1Q8WVM7 1258 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 MED15Q96RN5 788 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 ZHX3Q9H4I2 956 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 MCM8Q9UJA3 840 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 DENND2AQ9ULE3 1009 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 DUSP10Q9Y6W6 482 aa12.77□□□□□ -0.37
CNOT3-202ENST00000358389 EPHB4P54760 987 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 PREPLQ4J6C6 727 aaPredicted RBP12.76□□□□□ -0.37
CNOT3-202ENST00000358389 CPLX4Q7Z7G2 160 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 RNF217Q8TC41 542 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 GRIN2DO15399 1336 aa12.76□□□□□ -0.37
CNOT3-202ENST00000358389 TTC26A0AVF1 554 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms