RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PSD3Q9NYI0 1048 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
PTPRA-203ENST00000356147 XDHP47989 1333 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 SLIT3O75094 1523 aa11.45□□□□□ -0.58
PTPRA-203ENST00000356147 IRS4O14654 1257 aaPredicted RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 MTRQ99707 1265 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 TTC26A0AVF1 554 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 WTIPA6NIX2 430 aaPredicted RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 SYF2O95926 243 aaKnown RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 CSF1RP07333 972 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 ERCC3P19447 782 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 KLK7P49862 253 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 BCAMP50895 628 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 PPARAQ07869 468 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 KANK3Q6NY19 840 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 KIF6Q6ZMV9 814 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 ZBTB38Q8NAP3 1195 aaPredicted RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 NELFBQ8WX92 580 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 GNL3LQ9NVN8 582 aaKnown RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 ABCF2Q9UG63 623 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 EPN1Q9Y6I3 576 aaPredicted RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 TNKSO95271 1327 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 A0A0G2JS52 829 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 MACROD2A1Z1Q3 448 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 KCNJ18B7U540 433 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 PCCAP05165 728 aaPredicted RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 MATR3P43243 847 aaKnown RBP eCLIP11.44□□□□□ -0.583e-7■■■■□ 21.6
PTPRA-203ENST00000356147 CYP27A1Q02318 531 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 KCNJ12Q14500 433 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 SART3Q15020 963 aaKnown RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 CCDC122Q5T0U0 273 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 TMTC1Q8IUR5 882 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 CCDC148Q8NFR7 591 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 NAA15Q9BXJ9 866 aaKnown RBP11.44□□□□□ -0.58
PTPRA-203ENST00000356147 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
PTPRA-203ENST00000356147 STK36Q9NRP7 1315 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 NDUFA10O95299 355 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 NOP2P46087 812 aaKnown RBP11.43□□□□□ -0.58
PTPRA-203ENST00000356147 CYP26C1Q6V0L0 522 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 SMCR8Q8TEV9 937 aaPredicted RBP11.43□□□□□ -0.58
PTPRA-203ENST00000356147 SMARCAL1Q9NZC9 954 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 CEP131Q9UPN4 1083 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 TJP1Q07157 1748 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 RCCD1A6NED2 376 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 PP2D1A8MPX8 630 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 GGCXP38435 758 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 PMS1P54277 932 aaKnown RBP11.43□□□□□ -0.58
PTPRA-203ENST00000356147 CTSWP56202 376 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 AMPD2Q01433 879 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 MAP3K12Q12852 859 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 EZH2Q15910 746 aaKnown RBP11.43□□□□□ -0.58
PTPRA-203ENST00000356147 PKN1Q16512 942 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 KCTD19Q17RG1 926 aaPredicted RBP11.43□□□□□ -0.58
PTPRA-203ENST00000356147 WHAMMP3Q1A5X7 153 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 PIK3AP1Q6ZUJ8 805 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 GOLGA6L1Q8N7Z2 621 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 VGLL2Q8N8G2 317 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
PTPRA-203ENST00000356147 CAGE1Q8TC20 777 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 FAM71BQ8TC56 605 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 LACRTQ9GZZ8 138 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 AATFQ9NY61 560 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTPRA-203ENST00000356147 ECM29Q5VYK3 1845 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 PLEKHG2Q9H7P9 1386 aa11.43□□□□□ -0.58
PTPRA-203ENST00000356147 POTEB2H3BUK9 544 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 NMT2O60551 498 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 IVLP07476 585 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 KRT2P35908 639 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 C2orf54Q08AI8 447 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 ADGRA1Q86SQ6 560 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 CTAGE1Q96RT6 745 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 KRT23Q9C075 422 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 LRP2BPQ9P2M1 347 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 ADAMTS7Q9UKP4 1686 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 PDE2AO00408 941 aaPredicted RBP11.42□□□□□ -0.58
PTPRA-203ENST00000356147 NKRFO15226 690 aaKnown RBP eCLIP11.42□□□□□ -0.58
PTPRA-203ENST00000356147 PRCPP42785 496 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 E2F4Q16254 413 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 TCP11X2Q5H9J9 407 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 RASSF8Q8NHQ8 419 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 RASGRP4Q8TDF6 673 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 AFAP1L1Q8TED9 768 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 SOS2Q07890 1332 aaPredicted RBP11.42□□□□□ -0.58
PTPRA-203ENST00000356147 KIF13AQ9H1H9 1805 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 HERVK_113P62684 666 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 PAK1Q13153 545 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 IL17AQ16552 155 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 TTC38Q5R3I4 469 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 CTR9Q6PD62 1173 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 SH3RF1Q7Z6J0 888 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 KIAA1328Q86T90 577 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
PTPRA-203ENST00000356147 AGPAT5Q9NUQ2 364 aa11.42□□□□□ -0.58
PTPRA-203ENST00000356147 TTC31Q49AM3 519 aaPredicted RBP11.41□□□□□ -0.58
PTPRA-203ENST00000356147 HDAC7Q8WUI4 952 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms