RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 IGDCC4Q8TDY8 1250 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 PHF8Q9UPP1 1060 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 HSPA2P54652 639 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 PDCLQ13371 301 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 ANKRD18AQ8IVF6 992 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 HDAC7Q8WUI4 952 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 AIDAQ96BJ3 306 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 MAPK8IP1Q9UQF2 711 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 SLC12A7Q9Y666 1083 aa21.26■□□□□ 0.99
PRPF39-201ENST00000355765 TARSL2A2RTX5 802 aaKnown RBP21.25■□□□□ 0.99
PRPF39-201ENST00000355765 LMOD2Q6P5Q4 547 aa21.25■□□□□ 0.99
PRPF39-201ENST00000355765 SLC52A2Q9HAB3 445 aa21.25■□□□□ 0.99
PRPF39-201ENST00000355765 CEP83Q9Y592 693 aa21.25■□□□□ 0.99
PRPF39-201ENST00000355765 FMNL1O95466 1100 aaPredicted RBP21.25■□□□□ 0.99
PRPF39-201ENST00000355765 UBXN1Q04323 297 aa21.25■□□□□ 0.99
PRPF39-201ENST00000355765 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
PRPF39-201ENST00000355765 IBSPP21815 317 aaPredicted RBP21.24■□□□□ 0.99
PRPF39-201ENST00000355765 USP8P40818 1118 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 PPARAQ07869 468 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 RRAGBQ5VZM2 374 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 KIAA1328Q86T90 577 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 CNPY4Q8N129 248 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 SYMPKQ92797 1274 aaKnown RBP21.24■□□□□ 0.99
PRPF39-201ENST00000355765 ARL8AQ96BM9 186 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 STRN4Q9NRL3 753 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 NFAT5O94916 1531 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 TTC26A0AVF1 554 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 NDUFAB1O14561 156 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 IFIT3O14879 490 aaKnown RBP21.24■□□□□ 0.99
PRPF39-201ENST00000355765 ZNF579Q8NAF0 562 aaKnown RBP21.24■□□□□ 0.99
PRPF39-201ENST00000355765 ZKSCAN3Q9BRR0 538 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 HAUS4Q9H6D7 363 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 JADE2Q9NQC1 790 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 SUFUQ9UMX1 484 aa21.24■□□□□ 0.99
PRPF39-201ENST00000355765 DDX60Q8IY21 1712 aaKnown RBP21.23■□□□□ 0.99
PRPF39-201ENST00000355765 H7C1W4 665 aa21.23■□□□□ 0.99
PRPF39-201ENST00000355765 ATP1A2P50993 1020 aa21.23■□□□□ 0.99
PRPF39-201ENST00000355765 BANK1Q8NDB2 785 aa21.23■□□□□ 0.99
PRPF39-201ENST00000355765 DUSP10Q9Y6W6 482 aa21.23■□□□□ 0.99
PRPF39-201ENST00000355765 MST1RQ04912 1400 aa21.23■□□□□ 0.99
PRPF39-201ENST00000355765 MATR3P43243 847 aaKnown RBP eCLIP21.23■□□□□ 0.99
PRPF39-201ENST00000355765 CKAP4Q07065 602 aaKnown RBP21.23■□□□□ 0.99
PRPF39-201ENST00000355765 PAPD7Q5XG87 772 aaKnown RBP21.23■□□□□ 0.99
PRPF39-201ENST00000355765 VPS54Q9P1Q0 977 aa21.23■□□□□ 0.99
PRPF39-201ENST00000355765 RCCD1A6NED2 376 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 KCNJ18B7U540 433 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 SEMA3EO15041 775 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 SNRPA1P09661 255 aaKnown RBP21.22■□□□□ 0.99
PRPF39-201ENST00000355765 SLC7A5Q01650 507 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 KCNJ12Q14500 433 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 PROSER2Q86WR7 435 aaPredicted RBP21.22■□□□□ 0.99
PRPF39-201ENST00000355765 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 SH2D3CQ8N5H7 860 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 LACRTQ9GZZ8 138 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 CD248Q9HCU0 757 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 LIMA1Q9UHB6 759 aaKnown RBP21.22■□□□□ 0.99
PRPF39-201ENST00000355765 FAM184BQ9ULE4 1060 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 MACROD2A1Z1Q3 448 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 TTF1Q15361 905 aaPredicted RBP21.22■□□□□ 0.99
PRPF39-201ENST00000355765 KCTD16Q68DU8 428 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 PRPF38AQ8NAV1 312 aaKnown RBP21.22■□□□□ 0.99
PRPF39-201ENST00000355765 PLBD2Q8NHP8 589 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 AENQ8WTP8 325 aaKnown RBP21.22■□□□□ 0.99
PRPF39-201ENST00000355765 ORAI2Q96SN7 254 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 DMGDHQ9UI17 866 aaKnown RBP21.22■□□□□ 0.99
PRPF39-201ENST00000355765 AXIN2Q9Y2T1 843 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 ZEB2O60315 1214 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 CTDSPL2Q05D32 466 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 TICAM2Q86XR7 235 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 FAM212AQ96EL1 285 aa21.22■□□□□ 0.99
PRPF39-201ENST00000355765 TTMPQ5BVD1 217 aa21.21■□□□□ 0.99
PRPF39-201ENST00000355765 TTLL7Q6ZT98 887 aa21.21■□□□□ 0.99
PRPF39-201ENST00000355765 OTUD6BQ8N6M0 293 aa21.21■□□□□ 0.99
PRPF39-201ENST00000355765 TMEM87BQ96K49 555 aa21.21■□□□□ 0.99
PRPF39-201ENST00000355765 IDEP14735 1019 aa21.21■□□□□ 0.99
PRPF39-201ENST00000355765 TCP11X2Q5H9J9 407 aa21.21■□□□□ 0.99
PRPF39-201ENST00000355765 RRP12Q5JTH9 1297 aaKnown RBP21.21■□□□□ 0.99
PRPF39-201ENST00000355765 TSEN2Q8NCE0 465 aaKnown RBP21.21■□□□□ 0.99
PRPF39-201ENST00000355765 CABS1Q96KC9 395 aa21.21■□□□□ 0.99
PRPF39-201ENST00000355765 FOXP1Q9H334 677 aaPredicted RBP21.21■□□□□ 0.99
PRPF39-201ENST00000355765 CWC25Q9NXE8 425 aaPredicted RBP21.21■□□□□ 0.99
PRPF39-201ENST00000355765 DONSONQ9NYP3 566 aa21.21■□□□□ 0.99
PRPF39-201ENST00000355765 SIPA1L3O60292 1781 aaPredicted RBP21.2■□□□□ 0.98
PRPF39-201ENST00000355765 KIAA0754O94854 1291 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 SETQ01105 290 aaPredicted RBP21.2■□□□□ 0.98
PRPF39-201ENST00000355765 SH3RF1Q7Z6J0 888 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 TRIM22Q8IYM9 498 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 KCNH5Q8NCM2 988 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.2■□□□□ 0.98
PRPF39-201ENST00000355765 LRRC1Q9BTT6 524 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 ZSWIM5Q9P217 1185 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 CEP131Q9UPN4 1083 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 KDM6AO15550 1401 aaPredicted RBP21.2■□□□□ 0.98
PRPF39-201ENST00000355765 MYO5AQ9Y4I1 1855 aaKnown RBP21.2■□□□□ 0.98
PRPF39-201ENST00000355765 WNT7AO00755 349 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 IDH1O75874 414 aaKnown RBP21.2■□□□□ 0.98
PRPF39-201ENST00000355765 IFNAR1P17181 557 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 EARS2Q5JPH6 523 aaKnown RBP21.2■□□□□ 0.98
PRPF39-201ENST00000355765 GBP6Q6ZN66 633 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 OR8K1Q8NGG5 319 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms