RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 KLHL7Q8IXQ5 586 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 ANO3Q9BYT9 981 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 NOL3O60936 208 aaKnown RBP19.96■□□□□ 0.79
COL18A1-202ENST00000355480 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
COL18A1-202ENST00000355480 RBSNQ9H1K0 784 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 HAUS2Q9NVX0 235 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 YARSP54577 528 aaKnown RBP19.96■□□□□ 0.79
COL18A1-202ENST00000355480 SYCE1Q8N0S2 351 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 KIAA0556O60303 1618 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 SORBS3O60504 671 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 YWHAEP62258 255 aaKnown RBP19.96■□□□□ 0.79
COL18A1-202ENST00000355480 TRMT44Q8IYL2 757 aaKnown RBP19.96■□□□□ 0.79
COL18A1-202ENST00000355480 PSMB7Q99436 277 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 PSTPIP2Q9H939 334 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 ARHGEF12Q9NZN5 1544 aa19.96■□□□□ 0.79
COL18A1-202ENST00000355480 FAM207AQ9NSI2 230 aaPredicted RBP19.95■□□□□ 0.78
COL18A1-202ENST00000355480 PRR16Q569H4 304 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 DCAF15Q66K64 600 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 GPBP1Q86WP2 473 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 CMTR1Q8N1G2 835 aaKnown RBP19.95■□□□□ 0.78
COL18A1-202ENST00000355480 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 STMN2Q93045 179 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 ST7Q9NRC1 585 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 CYP2J2P51589 502 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 ZNF75DP51815 510 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 GADL1Q6ZQY3 521 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 CCDC105Q8IYK2 499 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 IWS1Q96ST2 819 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 PHKG2P15735 406 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 BCAMP50895 628 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 KMT5BQ4FZB7 885 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 GSDMBQ8TAX9 411 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 ERO1AQ96HE7 468 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 SERTAD1Q9UHV2 236 aa19.95■□□□□ 0.78
COL18A1-202ENST00000355480 AFAP1L2Q8N4X5 818 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 SDR42E1Q8WUS8 393 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 LACTBP83111 547 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-202ENST00000355480 ERCC6LQ2NKX8 1250 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 CERKLQ49MI3 558 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-202ENST00000355480 PEX26Q7Z412 305 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 IFNL3Q8IZI9 196 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 LRRC47Q8N1G4 583 aaKnown RBP19.94■□□□□ 0.78
COL18A1-202ENST00000355480 NLRC4Q9NPP4 1024 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 TCOF1Q13428 1488 aaKnown RBP19.94■□□□□ 0.78
COL18A1-202ENST00000355480 RRAGAQ7L523 313 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 GTF3C6Q969F1 213 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 POLR2MP0CAP2 368 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 ARHGAP27Q6ZUM4 889 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 MRPL11Q9Y3B7 192 aaKnown RBP19.94■□□□□ 0.78
COL18A1-202ENST00000355480 AFG3L2Q9Y4W6 797 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 FAM170AA1A519 330 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 GIGYF1O75420 1035 aaPredicted RBP19.94■□□□□ 0.78
COL18A1-202ENST00000355480 RPS6KA1Q15418 735 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 ZBTB8OSQ8IWT0 167 aa19.94■□□□□ 0.78
COL18A1-202ENST00000355480 PNOCQ13519 176 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 TTLL7Q6ZT98 887 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 BLIDQ8IZY5 108 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 GNA14O95837 355 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 ZBTB38Q8NAP3 1195 aaPredicted RBP19.93■□□□□ 0.78
COL18A1-202ENST00000355480 PPFIBP2Q8ND30 876 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 SLF1Q9BQI6 1058 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 KCNQ3O43525 872 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 CNGA1P29973 690 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 KIF22Q14807 665 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 TYW1BQ6NUM6 668 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 TAOK1Q7L7X3 1001 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 CCDC89Q8N998 374 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 BTDP43251 543 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 MTX1Q13505 466 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 MED10Q9BTT4 135 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 IMPACTQ9P2X3 320 aa19.93■□□□□ 0.78
COL18A1-202ENST00000355480 TECP42680 631 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 NUCKS1Q9H1E3 243 aaKnown RBP19.92■□□□□ 0.78
COL18A1-202ENST00000355480 U2AF2P26368 475 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■□□□□ 9.6
COL18A1-202ENST00000355480 LIG4P49917 911 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 AFAP1L1Q8TED9 768 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 CARD6Q9BX69 1037 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 KDRP35968 1356 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 XKR9Q5GH70 373 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 LGSNQ5TDP6 509 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 ANKRD35Q8N283 1001 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 PNMA1Q8ND90 353 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 DCPSQ96C86 337 aaKnown RBP19.92■□□□□ 0.78
COL18A1-202ENST00000355480 LSM14BQ9BX40 385 aaKnown RBP19.92■□□□□ 0.78
COL18A1-202ENST00000355480 SWAP70Q9UH65 585 aa19.92■□□□□ 0.78
COL18A1-202ENST00000355480 XRCC5P13010 732 aaKnown RBP19.91■□□□□ 0.78
COL18A1-202ENST00000355480 PDE6AP16499 860 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 ICA1Q05084 483 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 PABPC4Q13310 644 aaKnown RBP eCLIP19.91■□□□□ 0.782e-8■■■■□ 19.9
COL18A1-202ENST00000355480 ARHGAP6O43182 974 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 MCTP2Q6DN12 878 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 PCDHA12Q9UN75 941 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 ABCC2Q92887 1545 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 GADD45BO75293 160 aaPredicted RBP19.91■□□□□ 0.78
COL18A1-202ENST00000355480 GOLGA8HP0CJ92 632 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 HHATQ5VTY9 493 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 BSPRYQ5W0U4 402 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 NCAPG2Q86XI2 1143 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 FBXO11Q86XK2 927 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 SULF1Q8IWU6 871 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms