RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 POLR3EQ9NVU0 708 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 ZNF804BA4D1E1 1349 aa13.8□□□□□ -0.2
COLCA1-201ENST00000355430 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 GOLGA6L7A0A1B0GV03 622 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 EFCAB8A8MWE9 144 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 USP37Q86T82 979 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 PLA2G4DQ86XP0 818 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 TUBBP07437 444 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 TUBB2AQ13885 445 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 SLFNL1Q499Z3 407 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 TMTC1Q8IUR5 882 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 MICALL1Q8N3F8 863 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 TUBB2BQ9BVA1 445 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 GLT8D2Q9H1C3 349 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 BACH1O14867 736 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 GRIN3BO60391 1043 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 CLEC4GQ6UXB4 293 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 IL25Q9H293 177 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 RASSF4Q9H2L5 321 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 SEC31AO94979 1220 aaKnown RBP13.79□□□□□ -0.2
COLCA1-201ENST00000355430 KRT9P35527 623 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 SLC39A14Q15043 492 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 CIAPIN1Q6FI81 312 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 DYDC1Q8WWB3 177 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 KCNF1Q9H3M0 494 aa13.79□□□□□ -0.2
COLCA1-201ENST00000355430 TCP10L2B9ZVM9 353 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 CCDC144BQ3MJ40 725 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 GIMAP7Q8NHV1 300 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 JAKMIP2Q96AA8 810 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 HEG1Q9ULI3 1381 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 BTBD18B2RXH4 712 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 AFAP1L1Q8TED9 768 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 MAPKAPK5Q8IW41 473 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 ADGRB1O14514 1584 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 UBE4AQ14139 1066 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 NEK11Q8NG66 645 aa13.78□□□□□ -0.2
COLCA1-201ENST00000355430 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
COLCA1-201ENST00000355430 KIF23Q02241 960 aaPredicted RBP13.77□□□□□ -0.2
COLCA1-201ENST00000355430 CHRNDQ07001 517 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 TBC1D8BQ0IIM8 1120 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 EPHA10Q5JZY3 1008 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 CCDC174Q6PII3 467 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 GADL1Q6ZQY3 521 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 TGFBRAP1Q8WUH2 860 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 PCDHA5Q9Y5H7 936 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 MYOM1P52179 1685 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 NRKQ7Z2Y5 1582 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 IFT81Q8WYA0 676 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 FBXO3Q9UK99 471 aa13.77□□□□□ -0.2
COLCA1-201ENST00000355430 SLC1A4P43007 532 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 TTC31Q49AM3 519 aaPredicted RBP13.77□□□□□ -0.21
COLCA1-201ENST00000355430 GPATCH11Q8N954 259 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 GPCPD1Q9NPB8 672 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 GTF2A1P52655 376 aaPredicted RBP13.77□□□□□ -0.21
COLCA1-201ENST00000355430 IFNL3Q8IZI9 196 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
COLCA1-201ENST00000355430 PDE6AP16499 860 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 PDE4DQ08499 809 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 ZNF654Q8IZM8 581 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 OSBP2Q969R2 916 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 SPAG5Q96R06 1193 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 TSGA10Q9BZW7 698 aa13.77□□□□□ -0.21
COLCA1-201ENST00000355430 MNAT1P51948 309 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 NAA30Q147X3 362 aaPredicted RBP13.76□□□□□ -0.21
COLCA1-201ENST00000355430 R3HDM1Q15032 1099 aaKnown RBP13.76□□□□□ -0.21
COLCA1-201ENST00000355430 SARM1Q6SZW1 724 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 PNMA2Q9UL42 364 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 NOP56O00567 594 aaKnown RBP13.76□□□□□ -0.21
COLCA1-201ENST00000355430 IKBKBO14920 756 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 NEFHP12036 1026 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 CETN2P41208 172 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 PLCD1P51178 756 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 FBXO38Q6PIJ6 1188 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 FERMT2Q96AC1 680 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 GPR108Q9NPR9 543 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 CPS1P31327 1500 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 USP27XA6NNY8 438 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 ATP2C2O75185 946 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 LETM2Q2VYF4 491 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 MED23Q9ULK4 1368 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 AK9Q5TCS8 1911 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 EBAG9O00559 213 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 PPP6R2O75170 966 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 SSR1P43307 286 aaKnown RBP13.76□□□□□ -0.21
COLCA1-201ENST00000355430 SCNN1DP51172 638 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
COLCA1-201ENST00000355430 COL3A1P02461 1466 aaPredicted RBP13.75□□□□□ -0.21
COLCA1-201ENST00000355430 SEMA3EO15041 775 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 IGKV5-2P06315 115 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 MAP2K1Q02750 393 aaPredicted RBP13.75□□□□□ -0.21
COLCA1-201ENST00000355430 SEPT7Q16181 437 aaKnown RBP13.75□□□□□ -0.21
COLCA1-201ENST00000355430 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms