RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 ARHGAP26Q9UNA1 814 aa13.85□□□□□ -0.19
COL6A3-203ENST00000353578 LOC102724159A0A0B4J2E5 919 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 FOXP2O15409 715 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 PWP2Q15269 919 aaKnown RBP13.84□□□□□ -0.19
COL6A3-203ENST00000353578 TM6SF1Q9BZW5 370 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 CCT6AP40227 531 aaKnown RBP13.84□□□□□ -0.19
COL6A3-203ENST00000353578 AFMP43652 599 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 DNM2P50570 870 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 RCSD1Q6JBY9 416 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 UPF3AQ9H1J1 476 aaKnown RBP13.84□□□□□ -0.19
COL6A3-203ENST00000353578 SCHIP1Q9P0W5 487 aaPredicted RBP13.84□□□□□ -0.19
COL6A3-203ENST00000353578 EVA1CP58658 441 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 IPO5O00410 1097 aaKnown RBP13.84□□□□□ -0.19
COL6A3-203ENST00000353578 EXOC5O00471 708 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 GEN1Q17RS7 908 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 GRAMD1AQ96CP6 724 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 ZNF202O95125 648 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 EIF2S1P05198 315 aaKnown RBP13.84□□□□□ -0.19
COL6A3-203ENST00000353578 MCM7P33993 719 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 KLC1Q07866 573 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 MKNK2Q9HBH9 465 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 BRD1O95696 1058 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 KRT9P35527 623 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 SPC25Q9HBM1 224 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 NESP48681 1621 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 KRT8P05787 483 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 SERPINB4P48594 390 aa13.84□□□□□ -0.19
COL6A3-203ENST00000353578 BASP1P80723 227 aaKnown RBP13.84□□□□□ -0.19
COL6A3-203ENST00000353578 PLXNC1O60486 1568 aa13.83□□□□□ -0.19
COL6A3-203ENST00000353578 RAPGEF1Q13905 1077 aa13.83□□□□□ -0.19
COL6A3-203ENST00000353578 CERS3Q8IU89 383 aa13.83□□□□□ -0.19
COL6A3-203ENST00000353578 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.19
COL6A3-203ENST00000353578 FRMD3A2A2Y4 597 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 BAG2O95816 211 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 ANO1Q5XXA6 986 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 TRIM63Q969Q1 353 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 THOC1Q96FV9 657 aaKnown RBP13.83□□□□□ -0.2
COL6A3-203ENST00000353578 KAT14Q9H8E8 782 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 RPSAP08865 295 aaKnown RBP13.83□□□□□ -0.2
COL6A3-203ENST00000353578 AP1B1Q10567 949 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 POSTNQ15063 836 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 RSBN1LQ6PCB5 846 aaPredicted RBP13.83□□□□□ -0.2
COL6A3-203ENST00000353578 SESTD1Q86VW0 696 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 CEP70Q8NHQ1 597 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 GSDMAQ96QA5 445 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 KRT12Q99456 494 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 TRIM55Q9BYV6 548 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 KPNB1Q14974 876 aaKnown RBP13.83□□□□□ -0.2
COL6A3-203ENST00000353578 KRT79Q5XKE5 535 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 FAM177BA6PVY3 158 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 MX2P20592 715 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 CCDC80Q76M96 950 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 AK2P54819 239 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 CFAP36Q96G28 342 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 MAD1L1Q9Y6D9 718 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 KLF18A0A0U1RQI7 1052 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 LCMT1Q9UIC8 334 aa13.83□□□□□ -0.2
COL6A3-203ENST00000353578 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 HSPA9P38646 679 aaKnown RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 BICC1Q9H694 974 aaKnown RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 NPC1L1Q9UHC9 1359 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 KRIT1O00522 736 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 IGHDP01880 384 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 MYL1P05976 194 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 FAM133BQ5BKY9 247 aaKnown RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 ANO5Q75V66 913 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 KIAA1468Q9P260 1216 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 DBNLQ9UJU6 430 aaKnown RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 NFE2L3Q9Y4A8 694 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 CCND1P24385 295 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 GID8Q9NWU2 228 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 ATP1A2P50993 1020 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 KPNA2P52292 529 aaKnown RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 CASP8Q14790 479 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 UTP6Q9NYH9 597 aaKnown RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 SERPINB2P05120 415 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 RARS2Q5T160 578 aaKnown RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 MID2Q9UJV3 735 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 KIF11P52732 1056 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
COL6A3-203ENST00000353578 PRXQ9BXM0 1461 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 UQCRFS1P1P0C7P4 283 aa13.82□□□□□ -0.2
COL6A3-203ENST00000353578 BAG3O95817 575 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 Q6ZUG5 572 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 ZGPATQ8N5A5 531 aaKnown RBP13.81□□□□□ -0.2
COL6A3-203ENST00000353578 GSTO1P78417 241 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 ADALQ6DHV7 355 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 TRIML2Q8N7C3 387 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 AGTPBP1Q9UPW5 1226 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 TBC1D8O95759 1140 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 CYP2C19P33261 490 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
COL6A3-203ENST00000353578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL6A3-203ENST00000353578 TBC1D22AQ8WUA7 517 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 A0A1W2PQ27 194 aa13.81□□□□□ -0.2
COL6A3-203ENST00000353578 A0A1W2PQ64 194 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms