RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 ENTPD3O75355 529 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 TMEM47Q9BQJ4 181 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 BTBD18B2RXH4 712 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 PLEKHA8P1O95397 391 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 FKBP1CQ5VVH2 108 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 MTMR14Q8NCE2 650 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 MKL1Q969V6 931 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
EPB41-203ENST00000349460 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 ZNF202O95125 648 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 PFKFB1P16118 471 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 NDUFA8P51970 172 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 IQCB1Q15051 598 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 MAPKAPK5Q8IW41 473 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 CCDC144CPQ8IYA2 1237 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 TRIML1Q8N9V2 468 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 CCDC34Q96HJ3 373 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 RIOX1Q9H6W3 641 aa12.35□□□□□ -0.43
EPB41-203ENST00000349460 TTF2Q9UNY4 1162 aaKnown RBP12.35□□□□□ -0.43
EPB41-203ENST00000349460 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
EPB41-203ENST00000349460 ESPNB1AK53 854 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 PRDM1O75626 825 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 HLA-DOAP06340 250 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 FAM47AQ5JRC9 791 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 SHC4Q6S5L8 630 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 STK11IPQ8N1F8 1099 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 SHISA4Q96DD7 197 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 GPR101Q96P66 508 aaPredicted RBP12.34□□□□□ -0.43
EPB41-203ENST00000349460 FTOQ9C0B1 505 aaKnown RBP eCLIP12.34□□□□□ -0.43
EPB41-203ENST00000349460 BARHL2Q9NY43 387 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 FAM13BQ9NYF5 915 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 PCDHA4Q9UN74 947 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 ADAMTSL1Q8N6G6 1762 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 ZNF500O60304 480 aaPredicted RBP12.34□□□□□ -0.43
EPB41-203ENST00000349460 HOXA7P31268 230 aaPredicted RBP12.34□□□□□ -0.43
EPB41-203ENST00000349460 CRKP46108 304 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
EPB41-203ENST00000349460 EZH2Q15910 746 aaKnown RBP12.34□□□□□ -0.43
EPB41-203ENST00000349460 RAB11FIP4Q86YS3 637 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 FOXP4Q8IVH2 680 aaPredicted RBP12.34□□□□□ -0.43
EPB41-203ENST00000349460 MTMR4Q9NYA4 1195 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 SERPINB13Q9UIV8 391 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
EPB41-203ENST00000349460 SMIM22K7EJ46 135 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 IKBKBO14920 756 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 TGFB2P61812 414 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 ECE2O60344 883 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 PRPHP41219 470 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 SYKP43405 635 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 NLRP12P59046 1061 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 CCDC93Q567U6 631 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 ZMYND12Q9H0C1 365 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 GLT8D2Q9H1C3 349 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 CBX8Q9HC52 389 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 MYH4Q9Y623 1939 aa12.33□□□□□ -0.44
EPB41-203ENST00000349460 SLC26A4O43511 780 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 MCTP2Q6DN12 878 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 TATDN1Q6P1N9 297 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 CEP57L1Q8IYX8 460 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 MTMR8Q96EF0 704 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 DYNLL2Q96FJ2 89 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 GJB4Q9NTQ9 266 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 DTNBO60941 627 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 PARP1P09874 1014 aaKnown RBP12.32□□□□□ -0.44
EPB41-203ENST00000349460 GPATCH4Q5T3I0 446 aaKnown RBP12.32□□□□□ -0.44
EPB41-203ENST00000349460 SLC51AQ86UW1 340 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 PLA2G4DQ86XP0 818 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 NYAP2Q9P242 653 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 TTLL1O95922 423 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 ZNF165P49910 485 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 MDM2Q00987 491 aaPredicted RBP12.32□□□□□ -0.44
EPB41-203ENST00000349460 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 BLIDQ8IZY5 108 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.441e-8■□□□□ 10.5
EPB41-203ENST00000349460 MRFAP1L1Q96HT8 127 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 ZKSCAN5Q9Y2L8 839 aa12.32□□□□□ -0.44
EPB41-203ENST00000349460 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 NMT2O60551 498 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 GTPBP4Q9BZE4 634 aaKnown RBP12.31□□□□□ -0.44
EPB41-203ENST00000349460 KCNH3Q9ULD8 1083 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 G3V3G9 751 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 STXBP3O00186 592 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 GNA11P29992 359 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 SHMT1P34896 483 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 CEBPZQ03701 1054 aaKnown RBP12.31□□□□□ -0.44
EPB41-203ENST00000349460 SF3B2Q13435 895 aaKnown RBP12.31□□□□□ -0.44
EPB41-203ENST00000349460 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 PI4KBQ9UBF8 816 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 JAG2Q9Y219 1238 aa12.31□□□□□ -0.44
EPB41-203ENST00000349460 A0A1B0GVL5 298 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms