RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 NAA35Q5VZE5 725 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 KLC4Q9NSK0 619 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 TAB2Q9NYJ8 693 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 GUCY1A3Q02108 690 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 LMBR1LQ6UX01 489 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
RLIM-202ENST00000349225 CTNND2Q9UQB3 1225 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 LRRC10BA6NIK2 292 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 KRT14P02533 472 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 IFIT1P09914 478 aaKnown RBP16.03■□□□□ 0.16
RLIM-202ENST00000349225 SLC39A6Q13433 755 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 LRRC24Q50LG9 513 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 GIMAP7Q8NHV1 300 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 INCENPQ9NQS7 918 aa16.03■□□□□ 0.16
RLIM-202ENST00000349225 ANGEL1Q9UNK9 670 aaKnown RBP16.03■□□□□ 0.16
RLIM-202ENST00000349225 TTC26A0AVF1 554 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 GOLGA8KD6RF30 607 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 EPB41P11171 864 aaKnown RBP16.02■□□□□ 0.16
RLIM-202ENST00000349225 PDHBP11177 359 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 CCDC122Q5T0U0 273 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 SH3RF1Q7Z6J0 888 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 CCDC13Q8IYE1 715 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 STAMQ92783 540 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 CTAGE1Q96RT6 745 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 VCPKMTQ9H867 229 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 SMARCAL1Q9NZC9 954 aa16.02■□□□□ 0.16
RLIM-202ENST00000349225 N4BP3O15049 544 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 SEC24CP53992 1094 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 PAGE5Q96GU1 130 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 LIMA1Q9UHB6 759 aaKnown RBP16.02■□□□□ 0.15
RLIM-202ENST00000349225 DDX20Q9UHI6 824 aaKnown RBP16.02■□□□□ 0.15
RLIM-202ENST00000349225 ZEB2O60315 1214 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 LSP1P33241 339 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 SCARF1Q14162 830 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 CREG2Q8IUH2 290 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 ABTB2Q8N961 1025 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 HAUS4Q9H6D7 363 aa16.02■□□□□ 0.15
RLIM-202ENST00000349225 COPB1P53618 953 aaKnown RBP16.01■□□□□ 0.15
RLIM-202ENST00000349225 FKBP4Q02790 459 aaKnown RBP eCLIP16.01■□□□□ 0.15
RLIM-202ENST00000349225 RALYLQ86SE5 291 aaKnown RBP16.01■□□□□ 0.15
RLIM-202ENST00000349225 KIRREL3Q8IZU9 778 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 PAGR1Q9BTK6 254 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 STRN4Q9NRL3 753 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
RLIM-202ENST00000349225 FAM205CA6NFA0 338 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 SEMA3EO15041 775 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 FOXO4P98177 505 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
RLIM-202ENST00000349225 ZIM3Q96PE6 472 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 MYH13Q9UKX3 1938 aa16.01■□□□□ 0.15
RLIM-202ENST00000349225 HDGFP51858 240 aaKnown RBP16■□□□□ 0.15
RLIM-202ENST00000349225 SMTNP53814 917 aa16■□□□□ 0.15
RLIM-202ENST00000349225 HDLBPQ00341 1268 aaKnown RBP16■□□□□ 0.15
RLIM-202ENST00000349225 WASHC4Q2M389 1173 aa16■□□□□ 0.15
RLIM-202ENST00000349225 FILIP1LQ4L180 1135 aa16■□□□□ 0.15
RLIM-202ENST00000349225 PI16Q6UXB8 463 aa16■□□□□ 0.15
RLIM-202ENST00000349225 B4GALNT4Q76KP1 1039 aa16■□□□□ 0.15
RLIM-202ENST00000349225 DIS3L2Q8IYB7 885 aaKnown RBP16■□□□□ 0.15
RLIM-202ENST00000349225 SLC40A1Q9NP59 571 aa16■□□□□ 0.15
RLIM-202ENST00000349225 EHD2Q9NZN4 543 aa16■□□□□ 0.15
RLIM-202ENST00000349225 WNT7AO00755 349 aa16■□□□□ 0.15
RLIM-202ENST00000349225 MMP1P03956 469 aa16■□□□□ 0.15
RLIM-202ENST00000349225 IARSP41252 1262 aaKnown RBP16■□□□□ 0.15
RLIM-202ENST00000349225 ZNF473Q8WTR7 871 aaKnown RBP16■□□□□ 0.15
RLIM-202ENST00000349225 SHISA4Q96DD7 197 aa16■□□□□ 0.15
RLIM-202ENST00000349225 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
RLIM-202ENST00000349225 ODF2LQ9ULJ1 636 aa16■□□□□ 0.15
RLIM-202ENST00000349225 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
RLIM-202ENST00000349225 ZNF213O14771 459 aa16■□□□□ 0.15
RLIM-202ENST00000349225 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
RLIM-202ENST00000349225 CCDC40Q4G0X9 1142 aa16■□□□□ 0.15
RLIM-202ENST00000349225 YTHDF3Q7Z739 585 aaKnown RBP16■□□□□ 0.15
RLIM-202ENST00000349225 ZNF579Q8NAF0 562 aaKnown RBP16■□□□□ 0.15
RLIM-202ENST00000349225 SMCR8Q8TEV9 937 aaPredicted RBP16■□□□□ 0.15
RLIM-202ENST00000349225 A0A087WZG4 1122 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 INHBEP58166 350 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 IGDCC4Q8TDY8 1250 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 IP6K1Q92551 441 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 RPGRIP1Q96KN7 1286 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 SLC24A3Q9HC58 644 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 ZNF233A6NK53 670 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 KIAA0754O94854 1291 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 SETQ01105 290 aaPredicted RBP15.99■□□□□ 0.15
RLIM-202ENST00000349225 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
RLIM-202ENST00000349225 C6orf89Q6UWU4 347 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 CAGE1Q8TC20 777 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 TACO1Q9BSH4 297 aaKnown RBP15.99■□□□□ 0.15
RLIM-202ENST00000349225 EPN3Q9H201 632 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 LTKP29376 864 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 IRF2BP1Q8IU81 584 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 EGFL6Q8IUX8 553 aa15.99■□□□□ 0.15
RLIM-202ENST00000349225 CMTR1Q8N1G2 835 aaKnown RBP15.99■□□□□ 0.15
RLIM-202ENST00000349225 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
RLIM-202ENST00000349225 VEZTQ9HBM0 779 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms