RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SLC12A7Q9Y666 1083 aa22.25■■□□□ 1.15
CHMP4A-201ENST00000347519 ZBTB43O43298 467 aa22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 PFKFB2O60825 505 aa22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 PTPRAP18433 802 aa22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 SCRN1Q12765 414 aa22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 LDLRAD1Q5T700 205 aa22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 ARMC9Q7Z3E5 817 aa22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 CNKSR2Q8WXI2 1034 aa22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 FAM217BQ9NTX9 383 aaPredicted RBP22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 MTMR7Q9Y216 660 aa22.24■■□□□ 1.15
CHMP4A-201ENST00000347519 USP17L5A8MUK1 530 aa22.23■■□□□ 1.15
CHMP4A-201ENST00000347519 KIAA1755Q5JYT7 1200 aa22.23■■□□□ 1.15
CHMP4A-201ENST00000347519 CATIPQ7Z7H3 387 aa22.23■■□□□ 1.15
CHMP4A-201ENST00000347519 CCDC83Q8IWF9 413 aa22.23■■□□□ 1.15
CHMP4A-201ENST00000347519 NUP133Q8WUM0 1156 aa22.23■■□□□ 1.15
CHMP4A-201ENST00000347519 PASKQ96RG2 1323 aa22.23■■□□□ 1.15
CHMP4A-201ENST00000347519 GBA2Q9HCG7 927 aaPredicted RBP22.23■■□□□ 1.15
CHMP4A-201ENST00000347519 PICK1Q9NRD5 415 aa22.23■■□□□ 1.15
CHMP4A-201ENST00000347519 CDC27P30260 824 aa22.22■■□□□ 1.15
CHMP4A-201ENST00000347519 CUL4AQ13619 759 aa22.22■■□□□ 1.15
CHMP4A-201ENST00000347519 BECN1Q14457 450 aa22.22■■□□□ 1.15
CHMP4A-201ENST00000347519 GTF3C6Q969F1 213 aa22.22■■□□□ 1.15
CHMP4A-201ENST00000347519 SLKQ9H2G2 1235 aaPredicted RBP22.22■■□□□ 1.15
CHMP4A-201ENST00000347519 ELP3Q9H9T3 547 aa22.22■■□□□ 1.15
CHMP4A-201ENST00000347519 SH2B1Q9NRF2 756 aaPredicted RBP22.22■■□□□ 1.15
CHMP4A-201ENST00000347519 NID2Q14112 1375 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 GOLGA8AA7E2F4 631 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 DDAH1O94760 285 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 SYNE3Q6ZMZ3 975 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 ANKRD13AQ8IZ07 590 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 SMC1BQ8NDV3 1235 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 TMX2Q9Y320 296 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 CSADQ9Y600 493 aa22.21■■□□□ 1.15
CHMP4A-201ENST00000347519 ADD1P35611 737 aaKnown RBP22.2■■□□□ 1.14
CHMP4A-201ENST00000347519 METAP2P50579 478 aaKnown RBP eCLIP22.2■■□□□ 1.14
CHMP4A-201ENST00000347519 DGKZQ13574 1117 aa22.2■■□□□ 1.14
CHMP4A-201ENST00000347519 PPP4R3BQ5MIZ7 849 aa22.2■■□□□ 1.14
CHMP4A-201ENST00000347519 SPRYD3Q8NCJ5 442 aa22.2■■□□□ 1.14
CHMP4A-201ENST00000347519 WDR18Q9BV38 432 aa22.2■■□□□ 1.14
CHMP4A-201ENST00000347519 FOXD4L1Q9NU39 408 aa22.2■■□□□ 1.14
CHMP4A-201ENST00000347519 ZHX2Q9Y6X8 837 aa22.2■■□□□ 1.14
CHMP4A-201ENST00000347519 PTPRFP10586 1907 aa22.19■■□□□ 1.14
CHMP4A-201ENST00000347519 CTDNEP1O95476 244 aa22.19■■□□□ 1.14
CHMP4A-201ENST00000347519 GRM4Q14833 912 aa22.19■■□□□ 1.14
CHMP4A-201ENST00000347519 ZYXQ15942 572 aaKnown RBP22.19■■□□□ 1.14
CHMP4A-201ENST00000347519 RTN1Q16799 776 aa22.19■■□□□ 1.14
CHMP4A-201ENST00000347519 FANCBQ8NB91 859 aa22.19■■□□□ 1.14
CHMP4A-201ENST00000347519 F5H6K3 240 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 NDUFB10O96000 172 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 PDHBP11177 359 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 FKBP1BP68106 108 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 KLRC3Q07444 240 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 SPP2Q13103 211 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 SLFN13Q68D06 897 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 USP17L2Q6R6M4 530 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 STAG2Q8N3U4 1231 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 C2orf69Q8N8R5 385 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 IPO9Q96P70 1041 aaKnown RBP22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 MAD2L2Q9UI95 211 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 AFG3L2Q9Y4W6 797 aa22.18■■□□□ 1.14
CHMP4A-201ENST00000347519 PPFIA3O75145 1194 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 PLEKHA8P1O95397 391 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 GOLGA8HP0CJ92 632 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 SNHG28P0DPA3 235 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 GJA5P36382 358 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 RCAN1P53805 252 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 SLC35G1Q2M3R5 365 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 CMTR1Q8N1G2 835 aaKnown RBP22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 ZNF280CQ8ND82 737 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 GMCL1P1Q8NEA9 526 aa22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 NUP88Q99567 741 aaPredicted RBP22.17■■□□□ 1.14
CHMP4A-201ENST00000347519 FRMPD2Q68DX3 1309 aaPredicted RBP22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 PALM3A6NDB9 673 aaPredicted RBP22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 SPDYE5A6NIY4 337 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 RAD21O60216 631 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 CALM1P0DP23 149 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 CALM2P0DP24 149 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 CALM3P0DP25 149 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 MTMR2Q13614 643 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 NTRK3Q16288 839 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 SPICE1Q8N0Z3 855 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 MAP3K14Q99558 947 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 KIAA1683Q9H0B3 1180 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 VCPKMTQ9H867 229 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 AS3MTQ9HBK9 375 aa22.16■■□□□ 1.14
CHMP4A-201ENST00000347519 TRIM75PA6NK02 468 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 JAK2O60674 1132 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 NBPF11Q86T75 865 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 ERO1BQ86YB8 467 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 NSUN7Q8NE18 718 aaKnown RBP22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 OTUD5Q96G74 571 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 FEZ1Q99689 392 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 CPVLQ9H3G5 476 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 GPCPD1Q9NPB8 672 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 EMILIN3Q9NT22 766 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 SYNPO2Q9UMS6 1093 aa22.15■■□□□ 1.14
CHMP4A-201ENST00000347519 USP17L10C9JJH3 530 aa22.14■■□□□ 1.14
CHMP4A-201ENST00000347519 BACE1P56817 501 aa22.14■■□□□ 1.14
CHMP4A-201ENST00000347519 ZNF543Q08ER8 600 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms