RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 CTR9Q6PD62 1173 aa27.5■■□□□ 1.99
PTPA-202ENST00000347048 TMCO3Q6UWJ1 677 aa27.5■■□□□ 1.99
PTPA-202ENST00000347048 NGLY1Q96IV0 654 aa27.5■■□□□ 1.99
PTPA-202ENST00000347048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.5■■□□□ 1.99
PTPA-202ENST00000347048 CNTNAP5Q8WYK1 1306 aa27.5■■□□□ 1.99
PTPA-202ENST00000347048 COL4A1P02462 1669 aa27.5■■□□□ 1.99
PTPA-202ENST00000347048 PBX1P40424 430 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 AFMP43652 599 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 DYNLL1P63167 89 aaKnown RBP27.49■■□□□ 1.99
PTPA-202ENST00000347048 CTCFLQ8NI51 663 aaPredicted RBP27.49■■□□□ 1.99
PTPA-202ENST00000347048 ADD3Q9UEY8 706 aaKnown RBP27.49■■□□□ 1.99
PTPA-202ENST00000347048 MRFAP1Q9Y605 127 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 BAZ2AQ9UIF9 1905 aaKnown RBP27.49■■□□□ 1.99
PTPA-202ENST00000347048 ITIH6Q6UXX5 1313 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 PRDM1O75626 825 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 NPY5RQ15761 445 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 ZNF771Q7L3S4 317 aaPredicted RBP27.49■■□□□ 1.99
PTPA-202ENST00000347048 KIFC2Q96AC6 838 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 CCDC51Q96ER9 411 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 FHOD1Q9Y613 1164 aa27.49■■□□□ 1.99
PTPA-202ENST00000347048 ZRANB2O95218 330 aaKnown RBP eCLIP27.48■■□□□ 1.99
PTPA-202ENST00000347048 CD44P16070 742 aaKnown RBP27.48■■□□□ 1.99
PTPA-202ENST00000347048 IQUBQ8NA54 791 aa27.48■■□□□ 1.99
PTPA-202ENST00000347048 LAMB1P07942 1786 aa27.48■■□□□ 1.99
PTPA-202ENST00000347048 PPP1R3GB7ZBB8 358 aa27.48■■□□□ 1.99
PTPA-202ENST00000347048 RGL2O15211 777 aa27.48■■□□□ 1.99
PTPA-202ENST00000347048 NT5C2P49902 561 aa27.48■■□□□ 1.99
PTPA-202ENST00000347048 MEX3CQ5U5Q3 659 aaKnown RBP27.48■■□□□ 1.99
PTPA-202ENST00000347048 IGSF22Q8N9C0 903 aa27.48■■□□□ 1.99
PTPA-202ENST00000347048 SMARCC1Q92922 1105 aaPredicted RBP27.48■■□□□ 1.99
PTPA-202ENST00000347048 WDR24Q96S15 920 aa27.48■■□□□ 1.99
PTPA-202ENST00000347048 ZNF174Q15697 407 aa27.47■■□□□ 1.99
PTPA-202ENST00000347048 GPR161Q8N6U8 529 aaKnown RBP27.47■■□□□ 1.99
PTPA-202ENST00000347048 FAM84BQ96KN1 310 aaPredicted RBP27.47■■□□□ 1.99
PTPA-202ENST00000347048 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
PTPA-202ENST00000347048 FAM177A1Q8N128 213 aaPredicted RBP27.46■■□□□ 1.99
PTPA-202ENST00000347048 MINPP1Q9UNW1 487 aa27.46■■□□□ 1.99
PTPA-202ENST00000347048 COL5A3P25940 1745 aaPredicted RBP27.46■■□□□ 1.99
PTPA-202ENST00000347048 CYP2D7A0A087X1C5 515 aa27.46■■□□□ 1.99
PTPA-202ENST00000347048 SMIM22K7EJ46 135 aa27.46■■□□□ 1.99
PTPA-202ENST00000347048 TEX33O43247 280 aa27.46■■□□□ 1.99
PTPA-202ENST00000347048 PNMA6AP0CW24 399 aaPredicted RBP27.46■■□□□ 1.99
PTPA-202ENST00000347048 PTGDRQ13258 359 aa27.46■■□□□ 1.99
PTPA-202ENST00000347048 FBXO33Q7Z6M2 555 aa27.46■■□□□ 1.99
PTPA-202ENST00000347048 CNGA4Q8IV77 575 aa27.46■■□□□ 1.99
PTPA-202ENST00000347048 CRNKL1Q9BZJ0 848 aaKnown RBP27.46■■□□□ 1.99
PTPA-202ENST00000347048 ZNF831Q5JPB2 1677 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 USP17L12C9JPN9 530 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 USP17L21D6R901 530 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 SCG2P13521 617 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 PPP2R3AQ06190 1150 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 SPAG1Q07617 926 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 ERFEQ4G0M1 354 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 KLHL10Q6JEL2 608 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 NSUN4Q96CB9 384 aaKnown RBP27.45■■□□□ 1.98
PTPA-202ENST00000347048 ATP8A2Q9NTI2 1148 aa27.45■■□□□ 1.98
PTPA-202ENST00000347048 hCG_1642624A0A1W2PR95 340 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 FECHP22830 423 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 RBL2Q08999 1139 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 E2F4Q16254 413 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 SRBD1Q8N5C6 995 aaKnown RBP27.44■■□□□ 1.98
PTPA-202ENST00000347048 ZNF384Q8TF68 577 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 ACSBG1Q96GR2 724 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 ARPP21Q9UBL0 812 aaPredicted RBP27.44■■□□□ 1.98
PTPA-202ENST00000347048 MAST2Q6P0Q8 1798 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 A0A0G2JS52 829 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 GTPBP6O43824 516 aaPredicted RBP27.44■■□□□ 1.98
PTPA-202ENST00000347048 MFAP3LO75121 409 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 PFKFB3Q16875 520 aaPredicted RBP27.44■■□□□ 1.98
PTPA-202ENST00000347048 SBK1Q52WX2 424 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 RSRC2Q7L4I2 434 aaKnown RBP27.44■■□□□ 1.98
PTPA-202ENST00000347048 ADGRG1Q9Y653 693 aa27.44■■□□□ 1.98
PTPA-202ENST00000347048 CASZ1Q86V15 1759 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 NRAPQ86VF7 1730 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 WNT7AO00755 349 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 STX17P56962 302 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 NLRP5P59047 1200 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 TUBB2AQ13885 445 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 ARL6IP4Q66PJ3 421 aaKnown RBP27.43■■□□□ 1.98
PTPA-202ENST00000347048 RABGGTAQ92696 567 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 TUBB2BQ9BVA1 445 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 RMND1Q9NWS8 449 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 LIMA1Q9UHB6 759 aaKnown RBP27.43■■□□□ 1.98
PTPA-202ENST00000347048 XDHP47989 1333 aa27.43■■□□□ 1.98
PTPA-202ENST00000347048 ZBTB22O15209 634 aa27.42■■□□□ 1.98
PTPA-202ENST00000347048 CALML3P27482 149 aa27.42■■□□□ 1.98
PTPA-202ENST00000347048 SLC10A5Q5PT55 438 aa27.42■■□□□ 1.98
PTPA-202ENST00000347048 DESI2Q9BSY9 194 aa27.42■■□□□ 1.98
PTPA-202ENST00000347048 RWDD2AQ9UIY3 292 aa27.42■■□□□ 1.98
PTPA-202ENST00000347048 SOWAHDA6NJG2 315 aa27.42■■□□□ 1.98
PTPA-202ENST00000347048 KIF5BP33176 963 aa27.42■■□□□ 1.98
PTPA-202ENST00000347048 PDXDC2PQ6P474 469 aa27.42■■□□□ 1.98
PTPA-202ENST00000347048 FNBP4Q8N3X1 1017 aaPredicted RBP27.42■■□□□ 1.98
PTPA-202ENST00000347048 MARCH10Q8NA82 808 aaPredicted RBP27.42■■□□□ 1.98
PTPA-202ENST00000347048 MRPL44Q9H9J2 332 aaKnown RBP27.42■■□□□ 1.98
PTPA-202ENST00000347048 DCP1AQ9NPI6 582 aaPredicted RBP27.42■■□□□ 1.98
PTPA-202ENST00000347048 LRRC10BA6NIK2 292 aa27.41■■□□□ 1.98
PTPA-202ENST00000347048 TRIM14Q14142 442 aa27.41■■□□□ 1.98
PTPA-202ENST00000347048 RASGRP2Q7LDG7 609 aa27.41■■□□□ 1.98
PTPA-202ENST00000347048 GOLGA1Q92805 767 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms