RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 DYNLL2Q96FJ2 89 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 NUDT12Q9BQG2 462 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 PAK6Q9NQU5 681 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-203ENST00000346141 ARPP21Q9UBL0 812 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-203ENST00000346141 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-203ENST00000346141 RNF113AO15541 343 aaKnown RBP14.28□□□□□ -0.12
TUBD1-203ENST00000346141 SGPL1O95470 568 aa14.28□□□□□ -0.12
TUBD1-203ENST00000346141 PYGBP11216 843 aa14.28□□□□□ -0.12
TUBD1-203ENST00000346141 CDK8P49336 464 aa14.28□□□□□ -0.12
TUBD1-203ENST00000346141 TSHZ3Q63HK5 1081 aa14.28□□□□□ -0.12
TUBD1-203ENST00000346141 C16orf86Q6ZW13 317 aa14.28□□□□□ -0.12
TUBD1-203ENST00000346141 APPBP2Q92624 585 aa14.28□□□□□ -0.12
TUBD1-203ENST00000346141 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
TUBD1-203ENST00000346141 RPAP3Q9H6T3 665 aaPredicted RBP14.28□□□□□ -0.12
TUBD1-203ENST00000346141 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
TUBD1-203ENST00000346141 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
TUBD1-203ENST00000346141 CYP2D7A0A087X1C5 515 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 A0A1W2PRG0 241 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 PEX10O60683 326 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 SLC34A2O95436 690 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 XRCC5P13010 732 aaKnown RBP14.27□□□□□ -0.12
TUBD1-203ENST00000346141 ICA1Q05084 483 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 Q3C1V9 767 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 GIMAP6Q6P9H5 292 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 CTR9Q6PD62 1173 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 GPR142Q7Z601 462 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 PLEKHH3Q7Z736 793 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 UBE2Q1Q7Z7E8 422 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.12
TUBD1-203ENST00000346141 DEFB118Q96PH6 123 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 PORCNQ9H237 461 aa14.27□□□□□ -0.12
TUBD1-203ENST00000346141 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
TUBD1-203ENST00000346141 GLRX3O76003 335 aaKnown RBP14.26□□□□□ -0.13
TUBD1-203ENST00000346141 FARP2O94887 1054 aaPredicted RBP14.26□□□□□ -0.13
TUBD1-203ENST00000346141 AKR1B1P15121 316 aa14.26□□□□□ -0.13
TUBD1-203ENST00000346141 GNAT2P19087 354 aa14.26□□□□□ -0.13
TUBD1-203ENST00000346141 RGS2P41220 211 aa14.26□□□□□ -0.13
TUBD1-203ENST00000346141 LPAR1Q92633 364 aa14.26□□□□□ -0.13
TUBD1-203ENST00000346141 OSBP2Q969R2 916 aa14.26□□□□□ -0.13
TUBD1-203ENST00000346141 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
TUBD1-203ENST00000346141 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.26□□□□□ -0.13
TUBD1-203ENST00000346141 CWC22Q9HCG8 908 aaKnown RBP14.26□□□□□ -0.13
TUBD1-203ENST00000346141 TMX2Q9Y320 296 aa14.26□□□□□ -0.13
TUBD1-203ENST00000346141 BAZ2AQ9UIF9 1905 aaKnown RBP14.26□□□□□ -0.13
TUBD1-203ENST00000346141 RPTORQ8N122 1335 aa14.26□□□□□ -0.13
TUBD1-203ENST00000346141 CNMDO75829 334 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 TFRCP02786 760 aaKnown RBP14.25□□□□□ -0.13
TUBD1-203ENST00000346141 CYP2B6P20813 491 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 COG2Q14746 738 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 SBK1Q52WX2 424 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 MORN1Q5T089 497 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 TRIB2Q92519 343 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 USP6NLQ92738 828 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 CRBNQ96SW2 442 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 KANSL2Q9H9L4 492 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 HOXC10Q9NYD6 342 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 GSG1L2A8MUP6 293 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 GPAA1O43292 621 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 ZKSCAN1P17029 563 aaPredicted RBP14.25□□□□□ -0.13
TUBD1-203ENST00000346141 MX1P20591 662 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 AAMPQ13685 434 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 PI4K2BQ8TCG2 481 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 APBA2Q99767 749 aa14.25□□□□□ -0.13
TUBD1-203ENST00000346141 HMX1Q9NP08 348 aaPredicted RBP14.25□□□□□ -0.13
TUBD1-203ENST00000346141 MYH8P13535 1937 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 PLXNB2O15031 1838 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 SMIM22K7EJ46 135 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 HDAC1Q13547 482 aaPredicted RBP14.24□□□□□ -0.13
TUBD1-203ENST00000346141 MAP3K21Q5TCX8 1036 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 CLEC10AQ8IUN9 316 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 SIAH1Q8IUQ4 282 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 MB21D1Q8N884 522 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 OTUD7AQ8TE49 926 aaPredicted RBP14.24□□□□□ -0.13
TUBD1-203ENST00000346141 VCPKMTQ9H867 229 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 BTBD7Q9P203 1132 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 IVNS1ABPQ9Y6Y0 642 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 ROBO3Q96MS0 1386 aa14.24□□□□□ -0.13
TUBD1-203ENST00000346141 SLC15A5A6NIM6 579 aa14.23□□□□□ -0.13
TUBD1-203ENST00000346141 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
TUBD1-203ENST00000346141 TRIM32Q13049 653 aa14.23□□□□□ -0.13
TUBD1-203ENST00000346141 MAP2K5Q13163 448 aa14.23□□□□□ -0.13
TUBD1-203ENST00000346141 WDR78Q5VTH9 848 aa14.23□□□□□ -0.13
TUBD1-203ENST00000346141 ANKLE1Q8NAG6 615 aa14.23□□□□□ -0.13
TUBD1-203ENST00000346141 DPF3Q92784 378 aa14.23□□□□□ -0.13
TUBD1-203ENST00000346141 FSD1Q9BTV5 496 aa14.23□□□□□ -0.13
TUBD1-203ENST00000346141 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
TUBD1-203ENST00000346141 M0R2C6 588 aa14.22□□□□□ -0.13
TUBD1-203ENST00000346141 FLOT1O75955 427 aa14.22□□□□□ -0.13
TUBD1-203ENST00000346141 EEF2P13639 858 aaKnown RBP14.22□□□□□ -0.13
TUBD1-203ENST00000346141 TDO2P48775 406 aa14.22□□□□□ -0.13
TUBD1-203ENST00000346141 KIAA1755Q5JYT7 1200 aa14.22□□□□□ -0.13
TUBD1-203ENST00000346141 ANKRD45Q5TZF3 282 aa14.22□□□□□ -0.13
TUBD1-203ENST00000346141 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
TUBD1-203ENST00000346141 NACAP1Q9BZK3 213 aa14.22□□□□□ -0.13
TUBD1-203ENST00000346141 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
TUBD1-203ENST00000346141 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms