RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 SBNO1A3KN83 1393 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 EXOC5O00471 708 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 CABP7Q86V35 215 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 CLIC6Q96NY7 704 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 SH2D4BQ5SQS7 431 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 CCDC197Q8NCU1 140 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 MSANTD4Q8NCY6 345 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 PLBD2Q8NHP8 589 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 ZCRB1Q8TBF4 217 aaKnown RBP19.32■□□□□ 0.68
SPAST-202ENST00000345662 RCOR1Q9UKL0 485 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 ENC1O14682 589 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 TROVE2P10155 538 aaKnown RBP eCLIP19.31■□□□□ 0.68
SPAST-202ENST00000345662 PLS1Q14651 629 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 DYMQ7RTS9 669 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 MRPL12P52815 198 aaKnown RBP19.31■□□□□ 0.68
SPAST-202ENST00000345662 E2F5Q15329 346 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 HERC4Q5GLZ8 1057 aaPredicted RBP19.31■□□□□ 0.68
SPAST-202ENST00000345662 VPS54Q9P1Q0 977 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 HAUS3Q68CZ6 603 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 DDX23Q9BUQ8 820 aaKnown RBP19.31■□□□□ 0.68
SPAST-202ENST00000345662 EDC4Q6P2E9 1401 aaKnown RBP19.31■□□□□ 0.68
SPAST-202ENST00000345662 CCDC169A6NNP5 214 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 BUB1O43683 1085 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 SLC39A14Q15043 492 aa19.31■□□□□ 0.68
SPAST-202ENST00000345662 NONOQ15233 471 aaKnown RBP eCLIP19.31■□□□□ 0.68
SPAST-202ENST00000345662 MORC2Q9Y6X9 1032 aaPredicted RBP19.31■□□□□ 0.68
SPAST-202ENST00000345662 ADGRL2O95490 1459 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 ADCY9O60503 1353 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 COPB1P53618 953 aaKnown RBP19.3■□□□□ 0.68
SPAST-202ENST00000345662 KRT25Q7Z3Z0 450 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 RNF168Q8IYW5 571 aaPredicted RBP19.3■□□□□ 0.68
SPAST-202ENST00000345662 RPUSD2Q8IZ73 545 aaKnown RBP19.3■□□□□ 0.68
SPAST-202ENST00000345662 SNX29Q8TEQ0 813 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 HINFPQ9BQA5 517 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 POLR3EQ9NVU0 708 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 SARM1Q6SZW1 724 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 EAF2Q96CJ1 260 aaPredicted RBP19.3■□□□□ 0.68
SPAST-202ENST00000345662 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
SPAST-202ENST00000345662 I3L4J1 428 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 GAS8O95995 478 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 PDIA3P30101 505 aaKnown RBP19.3■□□□□ 0.68
SPAST-202ENST00000345662 CTDSPL2Q05D32 466 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 GCKRQ14397 625 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 CCDC14Q49A88 953 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 UNC5CLQ8IV45 518 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 KRT5P13647 590 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 VSTM4Q8IW00 320 aa19.3■□□□□ 0.68
SPAST-202ENST00000345662 ABCB6Q9NP58 842 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 ZMYM6O95789 1325 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 MAIP1Q8WWC4 291 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 WDR62O43379 1518 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 GTPBP6O43824 516 aaPredicted RBP19.29■□□□□ 0.68
SPAST-202ENST00000345662 GNA14O95837 355 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 PLCG2P16885 1265 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 RBL2Q08999 1139 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 RAD51AP2Q09MP3 1159 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 CHRNA2Q15822 529 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 TADA2BQ86TJ2 420 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 TRIM4Q9C037 500 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 ACTR5Q9H9F9 607 aaPredicted RBP19.29■□□□□ 0.68
SPAST-202ENST00000345662 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 PPP6R2O75170 966 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 KMT5BQ4FZB7 885 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 ARMC9Q7Z3E5 817 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 DPH5Q9H2P9 285 aa19.29■□□□□ 0.68
SPAST-202ENST00000345662 ZMYND10O75800 440 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 MAK16Q9BXY0 300 aaKnown RBP19.28■□□□□ 0.68
SPAST-202ENST00000345662 ADD1P35611 737 aaKnown RBP19.28■□□□□ 0.68
SPAST-202ENST00000345662 LIN9Q5TKA1 542 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 CLEC17AQ6ZS10 378 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 DCAF5Q96JK2 942 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 LSM14BQ9BX40 385 aaKnown RBP19.28■□□□□ 0.68
SPAST-202ENST00000345662 MAGI2Q86UL8 1455 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 YTHDC2Q9H6S0 1430 aaKnown RBP19.28■□□□□ 0.68
SPAST-202ENST00000345662 A0A087WWV3 80 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 SUN1O94901 812 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 TCHPQ9BT92 498 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 SMIM24O75264 130 aa19.28■□□□□ 0.68
SPAST-202ENST00000345662 N4BP2L2Q92802 583 aaPredicted RBP19.27■□□□□ 0.68
SPAST-202ENST00000345662 ZNF594Q96JF6 807 aaPredicted RBP19.27■□□□□ 0.68
SPAST-202ENST00000345662 PRDM1O75626 825 aa19.27■□□□□ 0.68
SPAST-202ENST00000345662 PICALMQ13492 652 aa19.27■□□□□ 0.68
SPAST-202ENST00000345662 PUM3Q15397 648 aaKnown RBP19.27■□□□□ 0.68
SPAST-202ENST00000345662 TCP11Q8WWU5 503 aa19.27■□□□□ 0.68
SPAST-202ENST00000345662 HSPD1P10809 573 aaKnown RBP19.27■□□□□ 0.68
SPAST-202ENST00000345662 RASIP1Q5U651 963 aa19.27■□□□□ 0.68
SPAST-202ENST00000345662 NBPF5PQ86XG9 351 aaPredicted RBP19.27■□□□□ 0.68
SPAST-202ENST00000345662 NELFCDQ8IXH7 590 aa19.27■□□□□ 0.68
SPAST-202ENST00000345662 GSDMAQ96QA5 445 aa19.27■□□□□ 0.68
SPAST-202ENST00000345662 NDC80O14777 642 aa19.27■□□□□ 0.67
SPAST-202ENST00000345662 AKNAD1Q5T1N1 836 aa19.27■□□□□ 0.67
SPAST-202ENST00000345662 TPX2Q9ULW0 747 aaKnown RBP19.27■□□□□ 0.67
SPAST-202ENST00000345662 ZAP70P43403 619 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 CC2D1AQ6P1N0 951 aaPredicted RBP19.26■□□□□ 0.67
SPAST-202ENST00000345662 ZNF790Q6PG37 636 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 P3H4Q92791 437 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 C19orf44Q9H6X5 657 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 ARL1P40616 181 aaPredicted RBP19.26■□□□□ 0.67
SPAST-202ENST00000345662 GYS2P54840 703 aa19.26■□□□□ 0.67
SPAST-202ENST00000345662 IRX4P78413 519 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms