RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SMIM24O75264 130 aa20■□□□□ 0.79
SMC4-201ENST00000344722 UAP1Q16222 522 aaPredicted RBP20■□□□□ 0.79
SMC4-201ENST00000344722 ANKRD42Q8N9B4 389 aa20■□□□□ 0.79
SMC4-201ENST00000344722 XAGE2Q96GT9 111 aa20■□□□□ 0.79
SMC4-201ENST00000344722 MYL10Q9BUA6 226 aa20■□□□□ 0.79
SMC4-201ENST00000344722 LARSQ9P2J5 1176 aaKnown RBP20■□□□□ 0.79
SMC4-201ENST00000344722 IQSEC3Q9UPP2 1182 aaPredicted RBP20■□□□□ 0.79
SMC4-201ENST00000344722 KIAA0556O60303 1618 aa20■□□□□ 0.79
SMC4-201ENST00000344722 PPP2R5AQ15172 486 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 CTTNBP2NLQ9P2B4 639 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 TROVE2P10155 538 aaKnown RBP eCLIP19.99■□□□□ 0.791e-12■■■■■ 61.2
SMC4-201ENST00000344722 E2F5Q15329 346 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 YTHDC2Q9H6S0 1430 aaKnown RBP19.99■□□□□ 0.79
SMC4-201ENST00000344722 GNA14O95837 355 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 TXNDC16Q9P2K2 825 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 PDIA3P30101 505 aaKnown RBP19.99■□□□□ 0.79
SMC4-201ENST00000344722 MAIP1Q8WWC4 291 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 PANX2Q96RD6 677 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 IMPG2Q9BZV3 1241 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 C19orf44Q9H6X5 657 aa19.99■□□□□ 0.79
SMC4-201ENST00000344722 GTPBP6O43824 516 aaPredicted RBP19.98■□□□□ 0.79
SMC4-201ENST00000344722 MAP3K19Q56UN5 1328 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 CCNT1O60563 726 aaKnown RBP19.98■□□□□ 0.79
SMC4-201ENST00000344722 FAM184BQ9ULE4 1060 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 ADGBQ8N7X0 1667 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 MCM9Q9NXL9 1143 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 SUN1O94901 812 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 KRT15P19012 456 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 IRX4P78413 519 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 DENND4BO75064 1496 aaPredicted RBP19.98■□□□□ 0.79
SMC4-201ENST00000344722 ENC1O14682 589 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 PSMC4P43686 418 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 CABP7Q86V35 215 aa19.98■□□□□ 0.79
SMC4-201ENST00000344722 HOXC9P31274 260 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 ANKRD7Q92527 254 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 CLIC6Q96NY7 704 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 PARP1P09874 1014 aaKnown RBP19.97■□□□□ 0.79
SMC4-201ENST00000344722 UNC5CLQ8IV45 518 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 PLBD2Q8NHP8 589 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 NNTQ13423 1086 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 ZKSCAN8Q15776 578 aaPredicted RBP19.97■□□□□ 0.79
SMC4-201ENST00000344722 SPDYE3A6NKU9 549 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 I3L4J1 428 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 CHUKO15111 745 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 GSDMAQ96QA5 445 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 USH1CQ9Y6N9 552 aa19.97■□□□□ 0.79
SMC4-201ENST00000344722 BUB1O43683 1085 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 NLRC4Q9NPP4 1024 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 GYS2P54840 703 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 KRT25Q7Z3Z0 450 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 ARMT1Q9H993 441 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 RESTQ13127 1097 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 NBPF6Q5VWK0 638 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 TRMT1LQ7Z2T5 733 aaKnown RBP19.96■□□□□ 0.79
SMC4-201ENST00000344722 NSUN7Q8NE18 718 aaKnown RBP19.96■□□□□ 0.79
SMC4-201ENST00000344722 NBPF4Q96M43 638 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 NDUFB9Q9Y6M9 179 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 TXNDC9O14530 226 aa19.96■□□□□ 0.79
SMC4-201ENST00000344722 TPD52P55327 224 aaPredicted RBP19.95■□□□□ 0.78
SMC4-201ENST00000344722 LINC00301Q8NCQ3 95 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 RNF14Q9UBS8 474 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 LRWD1Q9UFC0 647 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 TPX2Q9ULW0 747 aaKnown RBP19.95■□□□□ 0.78
SMC4-201ENST00000344722 CARMIL3Q8ND23 1372 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 ZSCAN20P17040 1043 aaPredicted RBP19.95■□□□□ 0.78
SMC4-201ENST00000344722 ARID5BQ14865 1188 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 KRT28Q7Z3Y7 464 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 NFATC2IPQ8NCF5 419 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 ENOX1Q8TC92 643 aaKnown RBP19.95■□□□□ 0.78
SMC4-201ENST00000344722 P3H4Q92791 437 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 SOWAHDA6NJG2 315 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 KIF1CO43896 1103 aaKnown RBP19.95■□□□□ 0.78
SMC4-201ENST00000344722 CYP2C19P33261 490 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 SEPT14Q6ZU15 432 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 LSM14BQ9BX40 385 aaKnown RBP19.95■□□□□ 0.78
SMC4-201ENST00000344722 GUCY2CP25092 1073 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 HAUS3Q68CZ6 603 aa19.95■□□□□ 0.78
SMC4-201ENST00000344722 OSBPL5Q9H0X9 879 aaPredicted RBP19.95■□□□□ 0.78
SMC4-201ENST00000344722 CNOT10Q9H9A5 744 aaKnown RBP19.95■□□□□ 0.78
SMC4-201ENST00000344722 GAS8O95995 478 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 TXKP42681 527 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 NONOQ15233 471 aaKnown RBP eCLIP19.94■□□□□ 0.782e-8■■■■■ 98.1
SMC4-201ENST00000344722 SDCCAG8Q86SQ7 713 aaPredicted RBP19.94■□□□□ 0.78
SMC4-201ENST00000344722 FNBP4Q8N3X1 1017 aaPredicted RBP19.94■□□□□ 0.78
SMC4-201ENST00000344722 EAF2Q96CJ1 260 aaPredicted RBP19.94■□□□□ 0.78
SMC4-201ENST00000344722 MRRFQ96E11 262 aaKnown RBP19.94■□□□□ 0.78
SMC4-201ENST00000344722 ARHGEF10O15013 1369 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 TAF5LO75529 589 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 ZMYND10O75800 440 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 GCKRQ14397 625 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 MSANTD4Q8NCY6 345 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 TCP11Q8WWU5 503 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 INTS9Q9NV88 658 aaKnown RBP19.94■□□□□ 0.78
SMC4-201ENST00000344722 TRPM2O94759 1503 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 RASIP1Q5U651 963 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 RETREG2Q8NC44 543 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 RPGRQ92834 1020 aaKnown RBP19.94■□□□□ 0.78
SMC4-201ENST00000344722 SIRT2Q8IXJ6 389 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 KRT12Q99456 494 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 FAM169AQ9Y6X4 670 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms