RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 PNMA6AP0CW24 399 aaPredicted RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 CCDC15Q0P6D6 951 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USPL1Q5W0Q7 1092 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 LRRC31Q6UY01 552 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 METTL16Q86W50 562 aaKnown RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 MYLK4Q86YV6 388 aaPredicted RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 NSUN7Q8NE18 718 aaKnown RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 TINF2Q9BSI4 451 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 FAM107BQ9H098 131 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 ZSWIM4Q9H7M6 989 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 DDX19AQ9NUU7 478 aaKnown RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 LMCD1Q9NZU5 365 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 A0A1B0GVL5 298 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L15C9J2P7 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L10C9JJH3 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L13C9JLJ4 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L12C9JPN9 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L11C9JVI0 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L21D6R901 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L18D6R9N7 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L22D6RA61 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L17D6RBQ6 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L19D6RCP7 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L20D6RJB6 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 ST5P78524 1137 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 USP17L24Q0WX57 530 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 FOXD4Q12950 439 aaPredicted RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 CCDC57Q2TAC2 916 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 RABL6Q3YEC7 729 aaPredicted RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 C11orf57Q6ZUT1 292 aaPredicted RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 APBB1IPQ7Z5R6 666 aaPredicted RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 OSBP2Q969R2 916 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 SRRTQ9BXP5 876 aaKnown RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 CLIP2Q9UDT6 1046 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 KIAA1024Q9UPX6 916 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 MAST3O60307 1309 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 BIN1O00499 593 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 RDXP35241 583 aaKnown RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 IFT88Q13099 833 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 SCARF1Q14162 830 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 TTC39AQ5SRH9 613 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 KCNV1Q6PIU1 500 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 CCDC144CPQ8IYA2 1237 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 SDF4Q9BRK5 362 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 IRX2Q9BZI1 471 aaPredicted RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 GOLPH3LQ9H4A5 285 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 CFAP45Q9UL16 551 aa9.89□□□□□ -0.83
SP140-201ENST00000343805 CHD2O14647 1828 aaKnown RBP9.89□□□□□ -0.83
SP140-201ENST00000343805 ZNF142P52746 1687 aaPredicted RBP9.88□□□□□ -0.83
SP140-201ENST00000343805 LMO7Q8WWI1 1683 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 ELP1O95163 1332 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 IPO5O00410 1097 aaKnown RBP9.88□□□□□ -0.83
SP140-201ENST00000343805 FAM200BP0CF97 657 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 CASP7P55210 303 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 CCDC73Q6ZRK6 1079 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 FSIP1Q8NA03 581 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 CTCFLQ8NI51 663 aaPredicted RBP9.88□□□□□ -0.83
SP140-201ENST00000343805 DENND2AQ9ULE3 1009 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 C1orf167Q5SNV9 1468 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 EYA2O00167 538 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 HNRNPH1P31943 449 aaKnown RBP9.88□□□□□ -0.83
SP140-201ENST00000343805 RAB27AP51159 221 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 FILIP1LQ4L180 1135 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 EGFLAMQ63HQ2 1017 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 PRPF38AQ8NAV1 312 aaKnown RBP9.88□□□□□ -0.83
SP140-201ENST00000343805 CAPN10Q9HC96 672 aa9.88□□□□□ -0.83
SP140-201ENST00000343805 ZNF335Q9H4Z2 1342 aaPredicted RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 RCCD1A6NED2 376 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 TTLL13PA6NNM8 815 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 USP17L5A8MUK1 530 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 FBXO45P0C2W1 286 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 RASA1P20936 1047 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 PDIA3P30101 505 aaKnown RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 IL15P40933 162 aaPredicted RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 PTK7Q13308 1070 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 NAA30Q147X3 362 aaPredicted RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 ANKRD18AQ8IVF6 992 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 SYTL4Q96C24 671 aaPredicted RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 TRMT1Q9NXH9 659 aaKnown RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 TMEM94Q12767 1356 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 RNF113AO15541 343 aaKnown RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 PFKFB2O60825 505 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 P4HBP07237 508 aaKnown RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 ZAP70P43403 619 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 ZNF75DP51815 510 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 CACTINQ8WUQ7 758 aaKnown RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 XAGE2Q96GT9 111 aa9.87□□□□□ -0.83
SP140-201ENST00000343805 UTP14AQ9BVJ6 771 aaKnown RBP9.87□□□□□ -0.83
SP140-201ENST00000343805 CPLX1O14810 134 aa9.86□□□□□ -0.83
SP140-201ENST00000343805 SKIP12755 728 aa9.86□□□□□ -0.83
SP140-201ENST00000343805 EIF5P55010 431 aaKnown RBP9.86□□□□□ -0.83
SP140-201ENST00000343805 TPD52L1Q16890 204 aaPredicted RBP9.86□□□□□ -0.83
SP140-201ENST00000343805 CCDC158Q5M9N0 1113 aa9.86□□□□□ -0.83
SP140-201ENST00000343805 ZMYM1Q5SVZ6 1142 aa9.86□□□□□ -0.83
SP140-201ENST00000343805 PUS7LQ9H0K6 701 aaKnown RBP9.86□□□□□ -0.83
SP140-201ENST00000343805 WWC3Q9ULE0 1092 aa9.86□□□□□ -0.83
SP140-201ENST00000343805 KLF18A0A0U1RQI7 1052 aa9.86□□□□□ -0.83
SP140-201ENST00000343805 EME2A4GXA9 379 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms