RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 NR2E3Q9Y5X4 410 aa21.52■■□□□ 1.04
USF2-202ENST00000343550 RPTORQ8N122 1335 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 A0A0D9SFI3 127 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 GSPT1P15170 499 aaKnown RBP21.51■■□□□ 1.03
USF2-202ENST00000343550 CYP2B6P20813 491 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 USP14P54578 494 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 ERVK-9P63128 1117 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 ERVK-24P63145 666 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 TRIM32Q13049 653 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 NMIQ13287 307 aaPredicted RBP21.51■■□□□ 1.03
USF2-202ENST00000343550 POTEEQ6S8J3 1075 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 CHRDL2Q6WN34 429 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 SLC44A5Q8NCS7 719 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 CCDC136Q96JN2 1154 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 PAGR1Q9BTK6 254 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 KIAA1683Q9H0B3 1180 aa21.51■■□□□ 1.03
USF2-202ENST00000343550 HMX1Q9NP08 348 aaPredicted RBP21.51■■□□□ 1.03
USF2-202ENST00000343550 CEP290O15078 2479 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L15C9J2P7 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L13C9JLJ4 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L11C9JVI0 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L18D6R9N7 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L22D6RA61 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L17D6RBQ6 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L19D6RCP7 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L20D6RJB6 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 XRCC5P13010 732 aaKnown RBP21.5■■□□□ 1.03
USF2-202ENST00000343550 CDK8P49336 464 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 USP17L24Q0WX57 530 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 CCAR1Q8IX12 1150 aaKnown RBP21.5■■□□□ 1.03
USF2-202ENST00000343550 ACER1Q8TDN7 264 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 SOCS4Q8WXH5 440 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 TRIB2Q92519 343 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 NACAP1Q9BZK3 213 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 MINDY4BA8MYZ0 360 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 FOXP2O15409 715 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 TDO2P48775 406 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 C16orf86Q6ZW13 317 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 PORCNQ9H237 461 aa21.5■■□□□ 1.03
USF2-202ENST00000343550 VPS53Q5VIR6 699 aa21.49■■□□□ 1.03
USF2-202ENST00000343550 CATSPERGQ6ZRH7 1159 aa21.49■■□□□ 1.03
USF2-202ENST00000343550 PAWRQ96IZ0 340 aaKnown RBP21.49■■□□□ 1.03
USF2-202ENST00000343550 EVI5O60447 810 aa21.48■■□□□ 1.03
USF2-202ENST00000343550 VCAM1P19320 739 aa21.48■■□□□ 1.03
USF2-202ENST00000343550 GUCY1A2P33402 732 aa21.48■■□□□ 1.03
USF2-202ENST00000343550 GPR142Q7Z601 462 aa21.48■■□□□ 1.03
USF2-202ENST00000343550 NECAB2Q7Z6G3 386 aa21.48■■□□□ 1.03
USF2-202ENST00000343550 RABGAP1Q9Y3P9 1069 aa21.48■■□□□ 1.03
USF2-202ENST00000343550 HIP1O00291 1037 aa21.47■■□□□ 1.03
USF2-202ENST00000343550 SEPT2Q15019 361 aa21.47■■□□□ 1.03
USF2-202ENST00000343550 CWC27Q6UX04 472 aaKnown RBP21.47■■□□□ 1.03
USF2-202ENST00000343550 PLEKHH3Q7Z736 793 aa21.47■■□□□ 1.03
USF2-202ENST00000343550 ZNF589Q86UQ0 364 aaPredicted RBP21.47■■□□□ 1.03
USF2-202ENST00000343550 TRMT44Q8IYL2 757 aaKnown RBP21.47■■□□□ 1.03
USF2-202ENST00000343550 ANKLE1Q8NAG6 615 aa21.47■■□□□ 1.03
USF2-202ENST00000343550 USP6NLQ92738 828 aa21.47■■□□□ 1.03
USF2-202ENST00000343550 NAPBQ9H115 298 aa21.47■■□□□ 1.03
USF2-202ENST00000343550 RBM27Q9P2N5 1060 aaKnown RBP21.47■■□□□ 1.03
USF2-202ENST00000343550 PLXNB2O15031 1838 aa21.47■■□□□ 1.03
USF2-202ENST00000343550 MORN1Q5T089 497 aa21.46■■□□□ 1.03
USF2-202ENST00000343550 MAP3K21Q5TCX8 1036 aa21.46■■□□□ 1.03
USF2-202ENST00000343550 DIS3LQ8TF46 1054 aaKnown RBP21.46■■□□□ 1.03
USF2-202ENST00000343550 CCDC17Q96LX7 622 aa21.46■■□□□ 1.03
USF2-202ENST00000343550 DIAPH3Q9NSV4 1193 aa21.46■■□□□ 1.03
USF2-202ENST00000343550 MPHOSPH10O00566 681 aaKnown RBP21.45■■□□□ 1.02
USF2-202ENST00000343550 CNMDO75829 334 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 HSPD1P10809 573 aaKnown RBP21.45■■□□□ 1.02
USF2-202ENST00000343550 PRKAR2AP13861 404 aaKnown RBP21.45■■□□□ 1.02
USF2-202ENST00000343550 RGS2P41220 211 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 CCNA1P78396 465 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 ALX1Q15699 326 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 SKAP1Q86WV1 359 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 STK11IPQ8N1F8 1099 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 AKR1B1P15121 316 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 ZKSCAN1P17029 563 aaPredicted RBP21.45■■□□□ 1.02
USF2-202ENST00000343550 ERICH6BQ5W0A0 696 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 LBX2Q6XYB7 198 aa21.45■■□□□ 1.02
USF2-202ENST00000343550 RPAP3Q9H6T3 665 aaPredicted RBP21.45■■□□□ 1.02
USF2-202ENST00000343550 CWC22Q9HCG8 908 aaKnown RBP21.45■■□□□ 1.02
USF2-202ENST00000343550 CCDC171Q6TFL3 1326 aa21.44■■□□□ 1.02
USF2-202ENST00000343550 RANBP2P49792 3224 aaKnown RBP21.44■■□□□ 1.02
USF2-202ENST00000343550 FGAP02671 866 aa21.44■■□□□ 1.02
USF2-202ENST00000343550 MFAP1P55081 439 aaKnown RBP21.44■■□□□ 1.02
USF2-202ENST00000343550 TMEM179Q6ZVK1 233 aa21.44■■□□□ 1.02
USF2-202ENST00000343550 MKNK2Q9HBH9 465 aa21.44■■□□□ 1.02
USF2-202ENST00000343550 OGDHLQ9ULD0 1010 aa21.44■■□□□ 1.02
USF2-202ENST00000343550 ROBO3Q96MS0 1386 aa21.44■■□□□ 1.02
USF2-202ENST00000343550 A0A1W2PRG0 241 aa21.43■■□□□ 1.02
USF2-202ENST00000343550 PPARAQ07869 468 aa21.43■■□□□ 1.02
USF2-202ENST00000343550 CACNB2Q08289 660 aaPredicted RBP21.43■■□□□ 1.02
USF2-202ENST00000343550 CCL14Q16627 93 aa21.43■■□□□ 1.02
USF2-202ENST00000343550 APBA2Q99767 749 aa21.43■■□□□ 1.02
USF2-202ENST00000343550 NBPF3Q9H094 633 aa21.43■■□□□ 1.02
USF2-202ENST00000343550 PRO3102Q9H379 93 aa21.43■■□□□ 1.02
USF2-202ENST00000343550 RASA1P20936 1047 aa21.42■■□□□ 1.02
USF2-202ENST00000343550 MNX1P50219 401 aaPredicted RBP21.42■■□□□ 1.02
USF2-202ENST00000343550 MAP2K5Q13163 448 aa21.42■■□□□ 1.02
USF2-202ENST00000343550 SIAH1Q8IUQ4 282 aa21.42■■□□□ 1.02
USF2-202ENST00000343550 BTBD7Q9P203 1132 aa21.42■■□□□ 1.02
USF2-202ENST00000343550 TRIOBPQ9H2D6 2365 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms