RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
CD55-202ENST00000343420 CEP290O15078 2479 aa20.25■□□□□ 0.83
CD55-202ENST00000343420 ROBO3Q96MS0 1386 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 MINDY4BA8MYZ0 360 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 PATL2C9JE40 543 aaKnown RBP20.24■□□□□ 0.83
CD55-202ENST00000343420 SGPL1O95470 568 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 APPP05067 770 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 XRCC5P13010 732 aaKnown RBP20.24■□□□□ 0.83
CD55-202ENST00000343420 CAPN2P17655 700 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 CYP2B6P20813 491 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 TDO2P48775 406 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 ZMYM1Q5SVZ6 1142 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 PLEKHH3Q7Z736 793 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 TANGO6Q9C0B7 1094 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 VCPKMTQ9H867 229 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 KANSL2Q9H9L4 492 aa20.24■□□□□ 0.83
CD55-202ENST00000343420 EPB41L4AQ9HCS5 686 aaPredicted RBP20.24■□□□□ 0.83
CD55-202ENST00000343420 PAK6Q9NQU5 681 aaPredicted RBP20.24■□□□□ 0.83
CD55-202ENST00000343420 PARP14Q460N5 1801 aa20.23■□□□□ 0.83
CD55-202ENST00000343420 PDE1AP54750 535 aa20.23■□□□□ 0.83
CD55-202ENST00000343420 KIAA1755Q5JYT7 1200 aa20.23■□□□□ 0.83
CD55-202ENST00000343420 IFNL3Q8IZI9 196 aa20.23■□□□□ 0.83
CD55-202ENST00000343420 USP6NLQ92738 828 aa20.23■□□□□ 0.83
CD55-202ENST00000343420 SEC62Q99442 399 aaKnown RBP20.23■□□□□ 0.83
CD55-202ENST00000343420 RWDD1Q9H446 243 aaPredicted RBP20.23■□□□□ 0.83
CD55-202ENST00000343420 MKNK2Q9HBH9 465 aa20.23■□□□□ 0.83
CD55-202ENST00000343420 CWC22Q9HCG8 908 aaKnown RBP20.23■□□□□ 0.83
CD55-202ENST00000343420 BTBD7Q9P203 1132 aa20.23■□□□□ 0.83
CD55-202ENST00000343420 EEF2P13639 858 aaKnown RBP20.22■□□□□ 0.83
CD55-202ENST00000343420 RGS2P41220 211 aa20.22■□□□□ 0.83
CD55-202ENST00000343420 MORN1Q5T089 497 aa20.22■□□□□ 0.83
CD55-202ENST00000343420 TRMT44Q8IYL2 757 aaKnown RBP20.22■□□□□ 0.83
CD55-202ENST00000343420 TRIB2Q92519 343 aa20.22■□□□□ 0.83
CD55-202ENST00000343420 NACAP1Q9BZK3 213 aa20.22■□□□□ 0.83
CD55-202ENST00000343420 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
CD55-202ENST00000343420 WDR46O15213 610 aaKnown RBP20.21■□□□□ 0.83
CD55-202ENST00000343420 RASA1P20936 1047 aa20.21■□□□□ 0.83
CD55-202ENST00000343420 ATP2B2Q01814 1243 aa20.21■□□□□ 0.83
CD55-202ENST00000343420 SPICE1Q8N0Z3 855 aa20.21■□□□□ 0.83
CD55-202ENST00000343420 STK11IPQ8N1F8 1099 aa20.21■□□□□ 0.83
CD55-202ENST00000343420 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
CD55-202ENST00000343420 DEFB118Q96PH6 123 aa20.21■□□□□ 0.83
CD55-202ENST00000343420 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.21■□□□□ 0.83
CD55-202ENST00000343420 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.21■□□□□ 0.83
CD55-202ENST00000343420 ZNF287Q9HBT7 754 aa20.21■□□□□ 0.83
CD55-202ENST00000343420 RPTORQ8N122 1335 aa20.21■□□□□ 0.83
CD55-202ENST00000343420 MYH4Q9Y623 1939 aa20.2■□□□□ 0.82
CD55-202ENST00000343420 FLOT1O75955 427 aa20.2■□□□□ 0.82
CD55-202ENST00000343420 TFRCP02786 760 aaKnown RBP20.2■□□□□ 0.82
CD55-202ENST00000343420 DSG3P32926 999 aa20.2■□□□□ 0.82
CD55-202ENST00000343420 TRIM32Q13049 653 aa20.2■□□□□ 0.82
CD55-202ENST00000343420 UBE2Q1Q7Z7E8 422 aa20.2■□□□□ 0.82
CD55-202ENST00000343420 SMC5Q8IY18 1101 aa20.2■□□□□ 0.82
CD55-202ENST00000343420 MB21D1Q8N884 522 aa20.2■□□□□ 0.82
CD55-202ENST00000343420 EXOC6Q8TAG9 804 aa20.2■□□□□ 0.82
CD55-202ENST00000343420 HMX1Q9NP08 348 aaPredicted RBP20.2■□□□□ 0.82
CD55-202ENST00000343420 SLC15A5A6NIM6 579 aa20.19■□□□□ 0.82
CD55-202ENST00000343420 ZKSCAN1P17029 563 aaPredicted RBP20.19■□□□□ 0.82
CD55-202ENST00000343420 MAP2K5Q13163 448 aa20.19■□□□□ 0.82
CD55-202ENST00000343420 WDR78Q5VTH9 848 aa20.19■□□□□ 0.82
CD55-202ENST00000343420 APBA2Q99767 749 aa20.19■□□□□ 0.82
CD55-202ENST00000343420 LNPKQ9C0E8 428 aa20.19■□□□□ 0.82
CD55-202ENST00000343420 CRISPLD2Q9H0B8 497 aa20.19■□□□□ 0.82
CD55-202ENST00000343420 GOPCQ9HD26 462 aa20.19■□□□□ 0.82
CD55-202ENST00000343420 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
CD55-202ENST00000343420 FARP2O94887 1054 aaPredicted RBP20.18■□□□□ 0.82
CD55-202ENST00000343420 PTPREP23469 700 aa20.18■□□□□ 0.82
CD55-202ENST00000343420 MAP3K21Q5TCX8 1036 aa20.18■□□□□ 0.82
CD55-202ENST00000343420 ZNF444Q8N0Y2 327 aaPredicted RBP20.18■□□□□ 0.82
CD55-202ENST00000343420 SPATC1LQ9H0A9 340 aa20.18■□□□□ 0.82
CD55-202ENST00000343420 NAPBQ9H115 298 aa20.18■□□□□ 0.82
CD55-202ENST00000343420 NYAP2Q9P242 653 aa20.18■□□□□ 0.82
CD55-202ENST00000343420 IVNS1ABPQ9Y6Y0 642 aa20.18■□□□□ 0.82
CD55-202ENST00000343420 GRB14Q14449 540 aa20.17■□□□□ 0.82
CD55-202ENST00000343420 B4GALNT3Q6L9W6 998 aa20.17■□□□□ 0.82
CD55-202ENST00000343420 TICAM2Q86XR7 235 aa20.17■□□□□ 0.82
CD55-202ENST00000343420 SHCBP1Q8NEM2 672 aa20.17■□□□□ 0.82
CD55-202ENST00000343420 MOV10L1Q9BXT6 1211 aaKnown RBP20.17■□□□□ 0.82
CD55-202ENST00000343420 ZNFX1Q9P2E3 1918 aaKnown RBP20.16■□□□□ 0.82
CD55-202ENST00000343420 PRDM1O75626 825 aa20.16■□□□□ 0.82
CD55-202ENST00000343420 IGHDP01880 384 aa20.16■□□□□ 0.82
CD55-202ENST00000343420 SLC3A2P08195 630 aaKnown RBP20.16■□□□□ 0.82
CD55-202ENST00000343420 PRKAR2AP13861 404 aaKnown RBP20.16■□□□□ 0.82
CD55-202ENST00000343420 PDE4BQ07343 736 aa20.16■□□□□ 0.82
CD55-202ENST00000343420 CCL14Q16627 93 aa20.16■□□□□ 0.82
CD55-202ENST00000343420 CCDC129Q6ZRS4 1044 aa20.16■□□□□ 0.82
CD55-202ENST00000343420 ATG4CQ96DT6 458 aa20.16■□□□□ 0.82
CD55-202ENST00000343420 HTATIP2Q9BUP3 242 aa20.16■□□□□ 0.82
CD55-202ENST00000343420 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
CD55-202ENST00000343420 IGKV6D-41A0A0C4DH26 115 aa20.15■□□□□ 0.82
CD55-202ENST00000343420 RAD21O60216 631 aa20.15■□□□□ 0.82
CD55-202ENST00000343420 PPARAQ07869 468 aa20.15■□□□□ 0.82
CD55-202ENST00000343420 CACNB2Q08289 660 aaPredicted RBP20.15■□□□□ 0.82
CD55-202ENST00000343420 CHD1LQ86WJ1 897 aa20.15■□□□□ 0.82
CD55-202ENST00000343420 ADAMTS5Q9UNA0 930 aa20.15■□□□□ 0.82
CD55-202ENST00000343420 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
CD55-202ENST00000343420 ZNF236Q9UL36 1845 aa20.15■□□□□ 0.82
CD55-202ENST00000343420 STRNO43815 780 aa20.14■□□□□ 0.81
CD55-202ENST00000343420 HOXC6P09630 235 aa20.14■□□□□ 0.81
CD55-202ENST00000343420 ERCC3P19447 782 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms