RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MYL10Q9BUA6 226 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 KCNJ14Q9UNX9 436 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 CTNND2Q9UQB3 1225 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 SLC12A7Q9Y666 1083 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 FAM169AQ9Y6X4 670 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 GOLGA6CA6NDK9 693 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 N4BP3O15049 544 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 GOLGA6DP0CG33 693 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 MYBL2P10244 700 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 CDC25AP30304 524 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 NR5A1Q13285 461 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 KCNV1Q6PIU1 500 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 TRIM22Q8IYM9 498 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 IFNL2Q8IZJ0 200 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 CNPY4Q8N129 248 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 PURBQ96QR8 312 aaKnown RBP10.89□□□□□ -0.67
HOXA1-201ENST00000343060 NUP88Q99567 741 aaPredicted RBP10.89□□□□□ -0.67
HOXA1-201ENST00000343060 MTA3Q9BTC8 594 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 GOLGA6AQ9NYA3 693 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 TRIM10Q9UDY6 481 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 KIF13AQ9H1H9 1805 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 FER1L4A9Z1Z3 1794 aa10.89□□□□□ -0.67
HOXA1-201ENST00000343060 PAPPAQ13219 1627 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 MYH6P13533 1939 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 EBAG9O00559 213 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 BMP15O95972 392 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 EPB41P11171 864 aaKnown RBP10.88□□□□□ -0.67
HOXA1-201ENST00000343060 CCT6AP40227 531 aaKnown RBP10.88□□□□□ -0.67
HOXA1-201ENST00000343060 MCAMP43121 646 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 CCT5P48643 541 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 SKOR1P84550 965 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 ITIH3Q06033 890 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 TCP11X2Q5H9J9 407 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 PI16Q6UXB8 463 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 FERMT2Q96AC1 680 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 CHP1Q99653 195 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 HDAC6Q9UBN7 1215 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 FAM184BQ9ULE4 1060 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 GUCA1BQ9UMX6 200 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 DOCK2Q92608 1830 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 LOC102724159A0A0B4J2E5 919 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 A0A1W2PQC6 194 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 TRIM75PA6NK02 468 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 A6NNZ2 444 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 GOLGA8KD6RF30 607 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 TATP17735 454 aaPredicted RBP10.88□□□□□ -0.67
HOXA1-201ENST00000343060 PWP2Q15269 919 aaKnown RBP10.88□□□□□ -0.67
HOXA1-201ENST00000343060 TTF1Q15361 905 aaPredicted RBP10.88□□□□□ -0.67
HOXA1-201ENST00000343060 MEA1Q16626 185 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 RTN1Q16799 776 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 TUBB8Q3ZCM7 444 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 TTLL7Q6ZT98 887 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 SMYD4Q8IYR2 804 aaPredicted RBP10.88□□□□□ -0.67
HOXA1-201ENST00000343060 CRACR2BQ8N4Y2 399 aaPredicted RBP10.88□□□□□ -0.67
HOXA1-201ENST00000343060 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
HOXA1-201ENST00000343060 TOMM22Q9NS69 142 aa10.88□□□□□ -0.67
HOXA1-201ENST00000343060 XDHP47989 1333 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 COL18A1P39060 1754 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 TCRBV5S4A2TA0A5A2 114 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 GOLGA6BA6NDN3 693 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 IFIT3O14879 490 aaKnown RBP10.87□□□□□ -0.67
HOXA1-201ENST00000343060 HNRNPH1P31943 449 aaKnown RBP10.87□□□□□ -0.67
HOXA1-201ENST00000343060 USP8P40818 1118 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 AFMP43652 599 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 CEBPAP49715 358 aaPredicted RBP10.87□□□□□ -0.67
HOXA1-201ENST00000343060 SART3Q15020 963 aaKnown RBP10.87□□□□□ -0.67
HOXA1-201ENST00000343060 E2F4Q16254 413 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 MMGT1Q8N4V1 131 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 PRPF38AQ8NAV1 312 aaKnown RBP10.87□□□□□ -0.67
HOXA1-201ENST00000343060 OR8K1Q8NGG5 319 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 OXER1Q8TDS5 423 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 EPSTI1Q96J88 318 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 PAGR1Q9BTK6 254 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 PLA2G12BQ9BX93 195 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 CAPS2Q9BXY5 557 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 CNNM2Q9H8M5 875 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 A1CFQ9NQ94 594 aaKnown RBP10.87□□□□□ -0.67
HOXA1-201ENST00000343060 TACC3Q9Y6A5 838 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 ARAP2Q8WZ64 1704 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 KCNJ18B7U540 433 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 CASP1P29466 404 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 LIG3P49916 1009 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 PAK1Q13153 545 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 KCNJ12Q14500 433 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 IQCEQ6IPM2 695 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 RPAINQ86UA6 219 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 FNBP4Q8N3X1 1017 aaPredicted RBP10.87□□□□□ -0.67
HOXA1-201ENST00000343060 ANKRD20A12PQ8NF67 263 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 JAKMIP2Q96AA8 810 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 STRBPQ96SI9 672 aaKnown RBP10.87□□□□□ -0.67
HOXA1-201ENST00000343060 TAB2Q9NYJ8 693 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 ZSWIM5Q9P217 1185 aa10.87□□□□□ -0.67
HOXA1-201ENST00000343060 MYH2Q9UKX2 1941 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 KCPQ6ZWJ8 1503 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 PDE2AO00408 941 aaPredicted RBP10.86□□□□□ -0.67
HOXA1-201ENST00000343060 ENC1O14682 589 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 KRT83P78385 493 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 CCDC57Q2TAC2 916 aa10.86□□□□□ -0.67
HOXA1-201ENST00000343060 ESCO1Q5FWF5 840 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms