RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 ZNF408Q9H9D4 720 aa24.15■■□□□ 1.46
SNX21-201ENST00000342644 PHIPQ8WWQ0 1821 aa24.15■■□□□ 1.46
SNX21-201ENST00000342644 FSTL1Q12841 308 aa24.15■■□□□ 1.46
SNX21-201ENST00000342644 MOB2Q70IA6 237 aa24.15■■□□□ 1.46
SNX21-201ENST00000342644 AS3MTQ9HBK9 375 aa24.15■■□□□ 1.46
SNX21-201ENST00000342644 HPS5Q9UPZ3 1129 aa24.15■■□□□ 1.46
SNX21-201ENST00000342644 A0A1W2PRG0 241 aa24.14■■□□□ 1.45
SNX21-201ENST00000342644 GOLGA8BA8MQT2 603 aa24.14■■□□□ 1.45
SNX21-201ENST00000342644 GMCL1P1Q8NEA9 526 aa24.14■■□□□ 1.45
SNX21-201ENST00000342644 CHMP4CQ96CF2 233 aa24.14■■□□□ 1.45
SNX21-201ENST00000342644 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.14■■□□□ 1.45
SNX21-201ENST00000342644 UBE2Q2LH0YL09 131 aa24.13■■□□□ 1.45
SNX21-201ENST00000342644 LARGE1O95461 756 aa24.13■■□□□ 1.45
SNX21-201ENST00000342644 SNHG28P0DPA3 235 aa24.13■■□□□ 1.45
SNX21-201ENST00000342644 ATP2B2Q01814 1243 aa24.13■■□□□ 1.45
SNX21-201ENST00000342644 CUL4AQ13619 759 aa24.13■■□□□ 1.45
SNX21-201ENST00000342644 SLKQ9H2G2 1235 aaPredicted RBP24.13■■□□□ 1.45
SNX21-201ENST00000342644 MICU3Q86XE3 530 aa24.12■■□□□ 1.45
SNX21-201ENST00000342644 ERO1BQ86YB8 467 aa24.12■■□□□ 1.45
SNX21-201ENST00000342644 LRRC47Q8N1G4 583 aaKnown RBP24.12■■□□□ 1.45
SNX21-201ENST00000342644 ZNF280CQ8ND82 737 aa24.12■■□□□ 1.45
SNX21-201ENST00000342644 ACER1Q8TDN7 264 aa24.12■■□□□ 1.45
SNX21-201ENST00000342644 GTF3C6Q969F1 213 aa24.12■■□□□ 1.45
SNX21-201ENST00000342644 KIAA1683Q9H0B3 1180 aa24.12■■□□□ 1.45
SNX21-201ENST00000342644 ZHX2Q9Y6X8 837 aa24.12■■□□□ 1.45
SNX21-201ENST00000342644 SPDYE5A6NIY4 337 aa24.11■■□□□ 1.45
SNX21-201ENST00000342644 ECE1P42892 770 aa24.11■■□□□ 1.45
SNX21-201ENST00000342644 METAP2P50579 478 aaKnown RBP eCLIP24.11■■□□□ 1.45
SNX21-201ENST00000342644 PPATQ06203 517 aa24.11■■□□□ 1.45
SNX21-201ENST00000342644 FANCBQ8NB91 859 aa24.11■■□□□ 1.45
SNX21-201ENST00000342644 NAP1L2Q9ULW6 460 aaPredicted RBP24.11■■□□□ 1.45
SNX21-201ENST00000342644 AFG3L2Q9Y4W6 797 aa24.11■■□□□ 1.45
SNX21-201ENST00000342644 CCDC196A0A1B0GTZ2 297 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 SCRN1Q12765 414 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 CCDC84Q86UT8 332 aaPredicted RBP24.1■■□□□ 1.45
SNX21-201ENST00000342644 CLMNQ96JQ2 1002 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 MYL10Q9BUA6 226 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 GOLGA8AA7E2F4 631 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 USP17L10C9JJH3 530 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 F5H6K3 240 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 DHX16O60231 1041 aaKnown RBP24.1■■□□□ 1.45
SNX21-201ENST00000342644 PDHBP11177 359 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 BACE1P56817 501 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 KLRC3Q07444 240 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 GRM4Q14833 912 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 NUP133Q8WUM0 1156 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 VCPKMTQ9H867 229 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 GOPCQ9HD26 462 aa24.1■■□□□ 1.45
SNX21-201ENST00000342644 FAM217BQ9NTX9 383 aaPredicted RBP24.1■■□□□ 1.45
SNX21-201ENST00000342644 RBM28Q9NW13 759 aaKnown RBP24.1■■□□□ 1.45
SNX21-201ENST00000342644 KIF5BP33176 963 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 USP14P54578 494 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 ST3GAL1Q11201 340 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 SPP2Q13103 211 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 STK3Q13188 491 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 RTN1Q16799 776 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 CTCFLQ8NI51 663 aaPredicted RBP24.09■■□□□ 1.45
SNX21-201ENST00000342644 DCAF4Q8WV16 495 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 GMCL1Q96IK5 515 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 ELP3Q9H9T3 547 aa24.09■■□□□ 1.45
SNX21-201ENST00000342644 PALM3A6NDB9 673 aaPredicted RBP24.08■■□□□ 1.45
SNX21-201ENST00000342644 C19orf81C9J6K1 198 aa24.08■■□□□ 1.45
SNX21-201ENST00000342644 RXRAP19793 462 aa24.08■■□□□ 1.45
SNX21-201ENST00000342644 CCT2P78371 535 aaKnown RBP24.08■■□□□ 1.45
SNX21-201ENST00000342644 PPIL2Q13356 520 aa24.08■■□□□ 1.45
SNX21-201ENST00000342644 SLFN13Q68D06 897 aa24.08■■□□□ 1.45
SNX21-201ENST00000342644 NECAB1Q8N987 351 aa24.08■■□□□ 1.45
SNX21-201ENST00000342644 LPAR1Q92633 364 aa24.08■■□□□ 1.45
SNX21-201ENST00000342644 SLC10A4Q96EP9 437 aa24.08■■□□□ 1.45
SNX21-201ENST00000342644 INTS4Q96HW7 963 aaKnown RBP24.08■■□□□ 1.45
SNX21-201ENST00000342644 NDUFB10O96000 172 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 CDC27P30260 824 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 GNAQP50148 359 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 ASPRV1Q53RT3 343 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 SH3D19Q5HYK7 790 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 RAB11FIP4Q86YS3 637 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 C12orf42Q96LP6 360 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 FEZ1Q99689 392 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 MAD2L2Q9UI95 211 aa24.07■■□□□ 1.44
SNX21-201ENST00000342644 CXCL11O14625 94 aa24.06■■□□□ 1.44
SNX21-201ENST00000342644 PARP1P09874 1014 aaKnown RBP24.06■■□□□ 1.44
SNX21-201ENST00000342644 GPATCH4Q5T3I0 446 aaKnown RBP24.06■■□□□ 1.44
SNX21-201ENST00000342644 CCDC83Q8IWF9 413 aa24.06■■□□□ 1.44
SNX21-201ENST00000342644 LLPHQ9BRT6 129 aaKnown RBP24.06■■□□□ 1.44
SNX21-201ENST00000342644 KCNH4Q9UQ05 1017 aa24.06■■□□□ 1.44
SNX21-201ENST00000342644 ADD1P35611 737 aaKnown RBP24.05■■□□□ 1.44
SNX21-201ENST00000342644 ZNF543Q08ER8 600 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 MTMR2Q13614 643 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 NTRK3Q16288 839 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 USP17L2Q6R6M4 530 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 CCDC144CPQ8IYA2 1237 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 OPTNQ96CV9 577 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 LZTS2Q9BRK4 669 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 NCOA5Q9HCD5 579 aaKnown RBP24.05■■□□□ 1.44
SNX21-201ENST00000342644 PTPRFP10586 1907 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 SMARCA1P28370 1054 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 SLC1A4P43007 532 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 SLC4A3P48751 1232 aa24.05■■□□□ 1.44
SNX21-201ENST00000342644 CPLX2Q6PUV4 134 aaKnown RBP24.05■■□□□ 1.44
SNX21-201ENST00000342644 SAPCD2Q86UD0 394 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms