RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 BRPF3Q9ULD4 1205 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 NUCB1Q02818 461 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 RAD51AP2Q09MP3 1159 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
TPM3-207ENST00000341372 MIGA1Q8NAN2 632 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 FAM174AQ8TBP5 190 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 SLC10A4Q96EP9 437 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 DHX36Q9H2U1 1008 aaKnown RBP12.35□□□□□ -0.43
TPM3-207ENST00000341372 SNCAIPQ9Y6H5 919 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 H3BRB1 525 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 FOXN1O15353 648 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 CA12O43570 354 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 MTMR2Q13614 643 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 MIGA2Q7L4E1 593 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
TPM3-207ENST00000341372 TGFBRAP1Q8WUH2 860 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 TUT1Q9H6E5 874 aaKnown RBP12.35□□□□□ -0.43
TPM3-207ENST00000341372 ANO2Q9NQ90 1003 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 CSADQ9Y600 493 aa12.35□□□□□ -0.43
TPM3-207ENST00000341372 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 PDE1AP54750 535 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 ERICH6BQ5W0A0 696 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 SAGE1Q9NXZ1 904 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
TPM3-207ENST00000341372 ABL1P00519 1130 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 RASA1P20936 1047 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 MAPK1P28482 360 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 INPP5BP32019 993 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 TM4SF4P48230 202 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 MAPKAPK5Q8IW41 473 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.43
TPM3-207ENST00000341372 AIDAQ96BJ3 306 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 OPTNQ96CV9 577 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 ASB16Q96NS5 453 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 OCEL1Q9H607 264 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 ELP3Q9H9T3 547 aa12.33□□□□□ -0.43
TPM3-207ENST00000341372 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.44
TPM3-207ENST00000341372 SLC34A2O95436 690 aa12.33□□□□□ -0.44
TPM3-207ENST00000341372 SREBF2Q12772 1141 aa12.33□□□□□ -0.44
TPM3-207ENST00000341372 MRPL58Q14197 206 aaKnown RBP12.33□□□□□ -0.44
TPM3-207ENST00000341372 ERO1BQ86YB8 467 aa12.33□□□□□ -0.44
TPM3-207ENST00000341372 ZKSCAN4Q969J2 545 aaPredicted RBP12.33□□□□□ -0.44
TPM3-207ENST00000341372 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
TPM3-207ENST00000341372 HERC5Q9UII4 1024 aaKnown RBP12.33□□□□□ -0.44
TPM3-207ENST00000341372 PTPRFP10586 1907 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 CHGBP05060 677 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 ZFYP08048 801 aaPredicted RBP12.32□□□□□ -0.44
TPM3-207ENST00000341372 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
TPM3-207ENST00000341372 CTCFP49711 727 aaPredicted RBP12.32□□□□□ -0.44
TPM3-207ENST00000341372 SLFNL1Q499Z3 407 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 NOP9Q86U38 636 aaKnown RBP12.32□□□□□ -0.44
TPM3-207ENST00000341372 LCORLQ8N3X6 602 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 CRNKL1Q9BZJ0 848 aaKnown RBP12.32□□□□□ -0.44
TPM3-207ENST00000341372 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 SLURP2P0DP57 97 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 USP5P45974 858 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 INHBEP58166 350 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 PPIL2Q13356 520 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 SCYL3Q8IZE3 742 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 RDH13Q8NBN7 331 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 APPBP2Q92624 585 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 EHD4Q9H223 541 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
TPM3-207ENST00000341372 BAZ2AQ9UIF9 1905 aaKnown RBP12.31□□□□□ -0.44
TPM3-207ENST00000341372 CTNND1O60716 968 aaKnown RBP12.31□□□□□ -0.44
TPM3-207ENST00000341372 MBD4O95243 580 aa12.31□□□□□ -0.44
TPM3-207ENST00000341372 PPATQ06203 517 aa12.31□□□□□ -0.44
TPM3-207ENST00000341372 PNMA1Q8ND90 353 aa12.31□□□□□ -0.44
TPM3-207ENST00000341372 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
TPM3-207ENST00000341372 ZNF592Q92610 1267 aa12.31□□□□□ -0.44
TPM3-207ENST00000341372 CFHR5Q9BXR6 569 aa12.31□□□□□ -0.44
TPM3-207ENST00000341372 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
TPM3-207ENST00000341372 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.31□□□□□ -0.44
TPM3-207ENST00000341372 RNF186Q9NXI6 227 aa12.31□□□□□ -0.44
TPM3-207ENST00000341372 PALD1Q9ULE6 856 aa12.31□□□□□ -0.44
TPM3-207ENST00000341372 SCAMP3O14828 347 aaKnown RBP12.3□□□□□ -0.44
TPM3-207ENST00000341372 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
TPM3-207ENST00000341372 FBXO45P0C2W1 286 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 ECM1Q16610 540 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 LRRFIP1Q32MZ4 808 aaKnown RBP12.3□□□□□ -0.44
TPM3-207ENST00000341372 ANKMY2Q8IV38 441 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 FOXP4Q8IVH2 680 aaPredicted RBP12.3□□□□□ -0.44
TPM3-207ENST00000341372 DHX38Q92620 1227 aaKnown RBP12.3□□□□□ -0.44
TPM3-207ENST00000341372 ARMT1Q9H993 441 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 DCP1AQ9NPI6 582 aaPredicted RBP12.3□□□□□ -0.44
TPM3-207ENST00000341372 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.3□□□□□ -0.44
TPM3-207ENST00000341372 KCNH4Q9UQ05 1017 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 FOSBP53539 338 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 C1orf216Q8TAB5 229 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 OSBP2Q969R2 916 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 EVI5LQ96CN4 794 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms