RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 MYH3P11055 1940 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 MAST3O60307 1309 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 GNPATO15228 680 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 RHOXF2BP0C7M4 288 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 NAA25Q14CX7 972 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 USPL1Q5W0Q7 1092 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 BLOC1S2Q6QNY1 142 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 VGLL2Q8N8G2 317 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 AKT1S1Q96B36 256 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
RTN3-203ENST00000341307 RHOXF2Q9BQY4 288 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 VIPAS39Q9H9C1 493 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 LY75O60449 1722 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 PDE6BP35913 854 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 PEX19P40855 299 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 MCAMP43121 646 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 SMTNP53814 917 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 ZMYM1Q5SVZ6 1142 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 BICDL1Q6ZP65 573 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.37□□□□□ -0.27
RTN3-203ENST00000341307 DRAXINQ8NBI3 349 aaPredicted RBP13.37□□□□□ -0.27
RTN3-203ENST00000341307 CCDC12Q8WUD4 166 aaPredicted RBP13.37□□□□□ -0.27
RTN3-203ENST00000341307 OSBP2Q969R2 916 aa13.37□□□□□ -0.27
RTN3-203ENST00000341307 RFX7Q2KHR2 1363 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 EIF3HO15372 352 aaKnown RBP eCLIP13.36□□□□□ -0.27
RTN3-203ENST00000341307 RNF113AO15541 343 aaKnown RBP13.36□□□□□ -0.27
RTN3-203ENST00000341307 ZNF202O95125 648 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 PDHBP11177 359 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 RPS6KB1P23443 525 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 C3orf20Q8ND61 904 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
RTN3-203ENST00000341307 SHTN1A0MZ66 631 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
RTN3-203ENST00000341307 PDE8BO95263 885 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 PSMA5P28066 241 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 STK3Q13188 491 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 TOB2Q14106 344 aaPredicted RBP13.36□□□□□ -0.27
RTN3-203ENST00000341307 RCSD1Q6JBY9 416 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 STOX1Q6ZVD7 989 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 MAB21L3Q8N8X9 362 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 SPDL1Q96EA4 605 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 HPCAL4Q9UM19 191 aa13.36□□□□□ -0.27
RTN3-203ENST00000341307 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.36□□□□□ -0.27
RTN3-203ENST00000341307 GOLGA6L9A6NEM1 432 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 ZBTB7AO95365 584 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 NTSR2O95665 410 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 SLC8A3P57103 927 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
RTN3-203ENST00000341307 IRX2Q9BZI1 471 aaPredicted RBP13.35□□□□□ -0.27
RTN3-203ENST00000341307 ATP6V0A4Q9HBG4 840 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 HELLSQ9NRZ9 838 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.35□□□□□ -0.27
RTN3-203ENST00000341307 ENO4A6NNW6 628 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 TFRCP02786 760 aaKnown RBP13.35□□□□□ -0.27
RTN3-203ENST00000341307 HSPD1P10809 573 aaKnown RBP13.35□□□□□ -0.27
RTN3-203ENST00000341307 PHKA1P46020 1223 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 KCNB1Q14721 858 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 TOGARAM2Q6ZUX3 1019 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 COL23A1Q86Y22 540 aaPredicted RBP13.35□□□□□ -0.27
RTN3-203ENST00000341307 CCAR1Q8IX12 1150 aaKnown RBP13.35□□□□□ -0.27
RTN3-203ENST00000341307 LMBR1Q8WVP7 490 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 PIK3R5Q8WYR1 880 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
RTN3-203ENST00000341307 COL4A1P02462 1669 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 NCAPHQ15003 741 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 PDCD2Q16342 344 aaPredicted RBP13.34□□□□□ -0.27
RTN3-203ENST00000341307 DPCR1Q3MIW9 517 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 CCDC40Q4G0X9 1142 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 FAM76AQ8TAV0 307 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 NEK1Q96PY6 1258 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 PUS7LQ9H0K6 701 aaKnown RBP13.34□□□□□ -0.27
RTN3-203ENST00000341307 VCPKMTQ9H867 229 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 CDC23Q9UJX2 597 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
RTN3-203ENST00000341307 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 RREB1Q92766 1687 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 PDCP20941 246 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 PPFIA1Q13136 1202 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 ENGASEQ8NFI3 743 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 OR8K1Q8NGG5 319 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.34□□□□□ -0.27
RTN3-203ENST00000341307 DPF2Q92785 391 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 SLC40A1Q9NP59 571 aa13.34□□□□□ -0.27
RTN3-203ENST00000341307 COL5A3P25940 1745 aaPredicted RBP13.33□□□□□ -0.28
RTN3-203ENST00000341307 PYGLP06737 847 aa13.33□□□□□ -0.28
RTN3-203ENST00000341307 GGCXP38435 758 aa13.33□□□□□ -0.28
RTN3-203ENST00000341307 FANCCQ00597 558 aa13.33□□□□□ -0.28
RTN3-203ENST00000341307 KARSQ15046 597 aaKnown RBP13.33□□□□□ -0.28
RTN3-203ENST00000341307 CCDC102BQ68D86 513 aa13.33□□□□□ -0.28
RTN3-203ENST00000341307 BPIFA3Q9BQP9 254 aa13.33□□□□□ -0.28
RTN3-203ENST00000341307 CAPS2Q9BXY5 557 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms