RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 NECTIN1Q15223 517 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 FAM83BQ5T0W9 1011 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 SMCR8Q8TEV9 937 aaPredicted RBP15.57■□□□□ 0.08
TUBD1-202ENST00000340993 KIAA1683Q9H0B3 1180 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 PLIN4Q96Q06 1357 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 C19orf81C9J6K1 198 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 ADCK5Q3MIX3 580 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 ANKRD23Q86SG2 305 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 TBC1D2Q9BYX2 928 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 KRT23Q9C075 422 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 GPHNQ9NQX3 736 aaPredicted RBP15.57■□□□□ 0.08
TUBD1-202ENST00000340993 TMX2Q9Y320 296 aa15.57■□□□□ 0.08
TUBD1-202ENST00000340993 TNKSO95271 1327 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 NDUFB10O96000 172 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 HSPA8P11142 646 aaKnown RBP15.56■□□□□ 0.08
TUBD1-202ENST00000340993 USP14P54578 494 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 SH3D19Q5HYK7 790 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 PROCA1Q8NCQ7 364 aaPredicted RBP15.56■□□□□ 0.08
TUBD1-202ENST00000340993 NCOA7Q8NI08 942 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 UBAC1Q9BSL1 405 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 PAGR1Q9BTK6 254 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 ASCC2Q9H1I8 757 aaPredicted RBP15.56■□□□□ 0.08
TUBD1-202ENST00000340993 SH2D4AQ9H788 454 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 VCPKMTQ9H867 229 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 CNNM2Q9H8M5 875 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 GOPCQ9HD26 462 aa15.56■□□□□ 0.08
TUBD1-202ENST00000340993 FRMPD2Q68DX3 1309 aaPredicted RBP15.55■□□□□ 0.08
TUBD1-202ENST00000340993 F5H6K3 240 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 MCCP23508 829 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 KLRC3Q07444 240 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 IQCA1Q86XH1 822 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 RAB11FIP4Q86YS3 637 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
TUBD1-202ENST00000340993 ANKRD13CQ8N6S4 541 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 ZSCAN10Q96SZ4 725 aaPredicted RBP15.55■□□□□ 0.08
TUBD1-202ENST00000340993 PARK7Q99497 189 aaKnown RBP15.55■□□□□ 0.08
TUBD1-202ENST00000340993 TMEM47Q9BQJ4 181 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 SENP2Q9HC62 589 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 ZFYVE28Q9HCC9 887 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 FBXO28Q9NVF7 368 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 NYAP2Q9P242 653 aa15.55■□□□□ 0.08
TUBD1-202ENST00000340993 CA12O43570 354 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 ALDH1A1P00352 501 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 IKQ13123 557 aaPredicted RBP15.54■□□□□ 0.08
TUBD1-202ENST00000340993 CCDC96Q2M329 555 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 RNF20Q5VTR2 975 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 SLFN13Q68D06 897 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 KCTD1Q719H9 257 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 P2RX7Q99572 595 aaKnown RBP15.54■□□□□ 0.08
TUBD1-202ENST00000340993 COL11A1P12107 1806 aaPredicted RBP15.54■□□□□ 0.08
TUBD1-202ENST00000340993 IFIT3O14879 490 aaKnown RBP15.54■□□□□ 0.08
TUBD1-202ENST00000340993 FLOT1O75955 427 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 OSBPP22059 807 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 ANTXR2P58335 489 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 ENAHQ8N8S7 591 aaPredicted RBP15.54■□□□□ 0.08
TUBD1-202ENST00000340993 JAKMIP1Q96N16 626 aaKnown RBP15.54■□□□□ 0.08
TUBD1-202ENST00000340993 USP26Q9BXU7 913 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
TUBD1-202ENST00000340993 PARP14Q460N5 1801 aa15.53■□□□□ 0.08
TUBD1-202ENST00000340993 PRC1O43663 620 aa15.53■□□□□ 0.08
TUBD1-202ENST00000340993 PCP11498 1178 aaKnown RBP15.53■□□□□ 0.08
TUBD1-202ENST00000340993 ZKSCAN1P17029 563 aaPredicted RBP15.53■□□□□ 0.08
TUBD1-202ENST00000340993 HSPA4P34932 840 aa15.53■□□□□ 0.08
TUBD1-202ENST00000340993 SLC4A3P48751 1232 aa15.53■□□□□ 0.08
TUBD1-202ENST00000340993 CTCFP49711 727 aaPredicted RBP15.53■□□□□ 0.08
TUBD1-202ENST00000340993 RCSD1Q6JBY9 416 aa15.53■□□□□ 0.08
TUBD1-202ENST00000340993 MB21D2Q8IYB1 491 aaPredicted RBP15.53■□□□□ 0.08
TUBD1-202ENST00000340993 ZNF296Q8WUU4 475 aaPredicted RBP15.53■□□□□ 0.08
TUBD1-202ENST00000340993 SNX14Q9Y5W7 946 aa15.53■□□□□ 0.08
TUBD1-202ENST00000340993 BAZ2BQ9UIF8 2168 aaKnown RBP15.53■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L15C9J2P7 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L13C9JLJ4 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L11C9JVI0 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L18D6R9N7 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L22D6RA61 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L17D6RBQ6 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L19D6RCP7 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L20D6RJB6 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 SLC1A4P43007 532 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 SNAP25P60880 206 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 USP17L24Q0WX57 530 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 TMEM67Q5HYA8 995 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 IFIT1BQ5T764 474 aaKnown RBP15.52■□□□□ 0.08
TUBD1-202ENST00000340993 CD99L2Q8TCZ2 262 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 C12orf42Q96LP6 360 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 ARHGAP39Q9C0H5 1083 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 KAT14Q9H8E8 782 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 GPCPD1Q9NPB8 672 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 SAGE1Q9NXZ1 904 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 PNMA3Q9UL41 463 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 DOCK3Q8IZD9 2030 aa15.52■□□□□ 0.08
TUBD1-202ENST00000340993 GPR25O00155 361 aa15.52■□□□□ 0.07
TUBD1-202ENST00000340993 TLR2O60603 784 aa15.52■□□□□ 0.07
TUBD1-202ENST00000340993 GOLGA8HP0CJ92 632 aa15.52■□□□□ 0.07
TUBD1-202ENST00000340993 HERVK_113P62684 666 aa15.52■□□□□ 0.07
TUBD1-202ENST00000340993 PABPC4Q13310 644 aaKnown RBP eCLIP15.52■□□□□ 0.07
TUBD1-202ENST00000340993 CATSPERGQ6ZRH7 1159 aa15.52■□□□□ 0.07
TUBD1-202ENST00000340993 KIFC2Q96AC6 838 aa15.52■□□□□ 0.07
TUBD1-202ENST00000340993 ATG4CQ96DT6 458 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms