RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 TRIM17Q9Y577 477 aa16.82■□□□□ 0.28
CTSL-201ENST00000340342 HTTP42858 3142 aa16.82■□□□□ 0.28
CTSL-201ENST00000340342 GNRH1P01148 92 aa16.81■□□□□ 0.28
CTSL-201ENST00000340342 OSBPP22059 807 aa16.81■□□□□ 0.28
CTSL-201ENST00000340342 HOXA7P31268 230 aaPredicted RBP16.81■□□□□ 0.28
CTSL-201ENST00000340342 USP14P54578 494 aa16.81■□□□□ 0.28
CTSL-201ENST00000340342 LACTBP83111 547 aaPredicted RBP16.81■□□□□ 0.28
CTSL-201ENST00000340342 KIAA1755Q5JYT7 1200 aa16.81■□□□□ 0.28
CTSL-201ENST00000340342 FBXO46Q6PJ61 603 aaPredicted RBP16.81■□□□□ 0.28
CTSL-201ENST00000340342 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
CTSL-201ENST00000340342 SMCR8Q8TEV9 937 aaPredicted RBP16.81■□□□□ 0.28
CTSL-201ENST00000340342 RNF41Q9H4P4 317 aaPredicted RBP16.81■□□□□ 0.28
CTSL-201ENST00000340342 ARHGEF10LQ9HCE6 1279 aa16.81■□□□□ 0.28
CTSL-201ENST00000340342 IL17RBQ9NRM6 502 aa16.8■□□□□ 0.28
CTSL-201ENST00000340342 MTMR4Q9NYA4 1195 aa16.8■□□□□ 0.28
CTSL-201ENST00000340342 CLIP2Q9UDT6 1046 aa16.8■□□□□ 0.28
CTSL-201ENST00000340342 TMX2Q9Y320 296 aa16.8■□□□□ 0.28
CTSL-201ENST00000340342 PARP14Q460N5 1801 aa16.8■□□□□ 0.28
CTSL-201ENST00000340342 B4E1Z4 1266 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 BCRP11274 1271 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
CTSL-201ENST00000340342 VCAM1P19320 739 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
CTSL-201ENST00000340342 SPICE1Q8N0Z3 855 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
CTSL-201ENST00000340342 ZSWIM8A7E2V4 1837 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 RLFQ13129 1914 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 RAD21O60216 631 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 KDM4AO75164 1064 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 CAPN15O75808 1086 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 STOX1Q6ZVD7 989 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 LRRC47Q8N1G4 583 aaKnown RBP16.79■□□□□ 0.28
CTSL-201ENST00000340342 C12orf42Q96LP6 360 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 NYAP2Q9P242 653 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 PTPN22Q9Y2R2 807 aa16.79■□□□□ 0.28
CTSL-201ENST00000340342 CCDC85CA6NKD9 419 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 E7EWF7 191 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 SLC27A2O14975 620 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 TTLL1O95922 423 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 NECTIN1Q15223 517 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 CREB3L3Q68CJ9 461 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 ESR2Q92731 530 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 SH2D4AQ9H788 454 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 VCPKMTQ9H867 229 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 STX8Q9UNK0 236 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 HPS5Q9UPZ3 1129 aa16.78■□□□□ 0.28
CTSL-201ENST00000340342 HOXD10P28358 340 aa16.77■□□□□ 0.27
CTSL-201ENST00000340342 PSMC4P43686 418 aa16.77■□□□□ 0.27
CTSL-201ENST00000340342 PRMT2P55345 433 aa16.77■□□□□ 0.27
CTSL-201ENST00000340342 IRX3P78415 501 aaPredicted RBP16.77■□□□□ 0.27
CTSL-201ENST00000340342 CAP1Q01518 475 aa16.77■□□□□ 0.27
CTSL-201ENST00000340342 RPAP3Q9H6T3 665 aaPredicted RBP16.77■□□□□ 0.27
CTSL-201ENST00000340342 CNNM2Q9H8M5 875 aa16.77■□□□□ 0.27
CTSL-201ENST00000340342 ZSWIM5Q9P217 1185 aa16.77■□□□□ 0.27
CTSL-201ENST00000340342 MGAMO43451 1857 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L15C9J2P7 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L13C9JLJ4 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L11C9JVI0 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L18D6R9N7 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L22D6RA61 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L17D6RBQ6 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L19D6RCP7 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L20D6RJB6 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 USP17L24Q0WX57 530 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 CYB5R4Q7L1T6 521 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 ANKRD13CQ8N6S4 541 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 CHMP4CQ96CF2 233 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 P2RX7Q99572 595 aaKnown RBP16.76■□□□□ 0.27
CTSL-201ENST00000340342 KRT23Q9C075 422 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 GOPCQ9HD26 462 aa16.76■□□□□ 0.27
CTSL-201ENST00000340342 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
CTSL-201ENST00000340342 FMNL1O95466 1100 aaPredicted RBP16.75■□□□□ 0.27
CTSL-201ENST00000340342 FCGRTP55899 365 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
CTSL-201ENST00000340342 FAM110CQ1W6H9 321 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 RASGRP2Q7LDG7 609 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 LPAR1Q92633 364 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 MKL1Q969V6 931 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 TRIM47Q96LD4 638 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
CTSL-201ENST00000340342 TANGO6Q9C0B7 1094 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 ARHGAP39Q9C0H5 1083 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
CTSL-201ENST00000340342 F5H6K3 240 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 PEX10O60683 326 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 REC8O95072 547 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 NDUFB10O96000 172 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 NOVP48745 357 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 KLRC3Q07444 240 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 TRDNQ13061 729 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 CATSPERGQ6ZRH7 1159 aa16.74■□□□□ 0.27
CTSL-201ENST00000340342 GTF3C2Q8WUA4 911 aaPredicted RBP16.74■□□□□ 0.27
CTSL-201ENST00000340342 WDR46O15213 610 aaKnown RBP16.73■□□□□ 0.27
CTSL-201ENST00000340342 CTGFP29279 349 aa16.73■□□□□ 0.27
CTSL-201ENST00000340342 HERVK_113P62684 666 aa16.73■□□□□ 0.27
CTSL-201ENST00000340342 FAM83BQ5T0W9 1011 aa16.73■□□□□ 0.27
CTSL-201ENST00000340342 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
CTSL-201ENST00000340342 CHST3Q7LGC8 479 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms