RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 F8W031 263 aaPredicted RBP12.77□□□□□ -0.37
LRP1-202ENST00000338962 H7C1D1 291 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 NMT2O60551 498 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 PTMAP06454 111 aaKnown RBP12.77□□□□□ -0.37
LRP1-202ENST00000338962 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.37
LRP1-202ENST00000338962 EPS15P42566 896 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 PLCB2Q00722 1185 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 SLF2Q8IX21 1173 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 CTCFLQ8NI51 663 aaPredicted RBP12.77□□□□□ -0.37
LRP1-202ENST00000338962 TGFBRAP1Q8WUH2 860 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 ZBED3Q96IU2 234 aaPredicted RBP12.77□□□□□ -0.37
LRP1-202ENST00000338962 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 KCNJ14Q9UNX9 436 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 GAKO14976 1311 aa12.77□□□□□ -0.37
LRP1-202ENST00000338962 SHTN1A0MZ66 631 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 IQCA1LA6NCM1 817 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 ADCY5O95622 1261 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 CAVIN2O95810 425 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 BTDP43251 543 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 CRKP46108 304 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 NDUFA8P51970 172 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 FMR1NBQ8N0W7 255 aaPredicted RBP12.76□□□□□ -0.37
LRP1-202ENST00000338962 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 ZDHHC15Q96MV8 337 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 FOXP1Q9H334 677 aaPredicted RBP12.76□□□□□ -0.37
LRP1-202ENST00000338962 MKNK2Q9HBH9 465 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 ZNF646O15015 1829 aaPredicted RBP12.76□□□□□ -0.37
LRP1-202ENST00000338962 PSME4Q14997 1843 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 ROBO3Q96MS0 1386 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 PPP6R2O75170 966 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 PLCG2P16885 1265 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 LMOD1P29536 600 aaPredicted RBP12.76□□□□□ -0.37
LRP1-202ENST00000338962 MARCKSP29966 332 aaPredicted RBP12.76□□□□□ -0.37
LRP1-202ENST00000338962 APOBEC3HQ6NTF7 200 aaKnown RBP12.76□□□□□ -0.37
LRP1-202ENST00000338962 SDF4Q9BRK5 362 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 MYOZ2Q9NPC6 264 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 ADARB2Q9NS39 739 aaKnown RBP12.76□□□□□ -0.37
LRP1-202ENST00000338962 HACL1Q9UJ83 578 aa12.76□□□□□ -0.37
LRP1-202ENST00000338962 GPR75-ASB3A0A0A6YYF3 556 aa12.75□□□□□ -0.37
LRP1-202ENST00000338962 PLEKHA8P1O95397 391 aa12.75□□□□□ -0.37
LRP1-202ENST00000338962 TPM2P07951 284 aa12.75□□□□□ -0.37
LRP1-202ENST00000338962 ZNF165P49910 485 aa12.75□□□□□ -0.37
LRP1-202ENST00000338962 TFAP4Q01664 338 aa12.75□□□□□ -0.37
LRP1-202ENST00000338962 MAPKAPK5Q8IW41 473 aa12.75□□□□□ -0.37
LRP1-202ENST00000338962 ZNF287Q9HBT7 754 aa12.75□□□□□ -0.37
LRP1-202ENST00000338962 PRPF3O43395 683 aaKnown RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 CMA1P23946 247 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 FUT2Q10981 343 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 STX1AQ16623 288 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 RILPL1Q5EBL4 403 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 AXDND1Q5T1B0 1012 aaPredicted RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 TMTC3Q6ZXV5 915 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 LUZP1Q86V48 1076 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 MAP3K14Q99558 947 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 DNAJC25Q9H1X3 360 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 TAF1DQ9H5J8 278 aaPredicted RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 CBX8Q9HC52 389 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 NOL7Q9UMY1 257 aaKnown RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 V9GY48 417 aaPredicted RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 WNT10BO00744 389 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 EGFRP00533 1210 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 KIF5BP33176 963 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 EPHX2P34913 555 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 PTPAQ15257 358 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 USP50Q70EL3 339 aaPredicted RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 SAMD7Q7Z3H4 446 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 KAT14Q9H8E8 782 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 SAP30BPQ9UHR5 308 aaKnown RBP12.74□□□□□ -0.37
LRP1-202ENST00000338962 NAV1Q8NEY1 1877 aa12.74□□□□□ -0.37
LRP1-202ENST00000338962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
LRP1-202ENST00000338962 WDHD1O75717 1129 aaPredicted RBP12.73□□□□□ -0.37
LRP1-202ENST00000338962 PFKFB1P16118 471 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
LRP1-202ENST00000338962 NR5A1Q13285 461 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 ZRSR1Q15695 479 aaKnown RBP12.73□□□□□ -0.37
LRP1-202ENST00000338962 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 RCSD1Q6JBY9 416 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 DGKHQ86XP1 1220 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 ZNF444Q8N0Y2 327 aaPredicted RBP12.73□□□□□ -0.37
LRP1-202ENST00000338962 VPS54Q9P1Q0 977 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 WDR90Q96KV7 1748 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 hCG_1642624A0A1W2PR95 340 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 PLCD1P51178 756 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 PKN1Q16512 942 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
LRP1-202ENST00000338962 TRPM4Q8TD43 1214 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms