RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZCCHC17Q9NP64 241 aaKnown RBP14.01□□□□□ -0.17
SPTLC1-202ENST00000337841 EMILIN3Q9NT22 766 aa14.01□□□□□ -0.17
SPTLC1-202ENST00000337841 SNX14Q9Y5W7 946 aa14.01□□□□□ -0.17
SPTLC1-202ENST00000337841 TAF6LQ9Y6J9 622 aa14.01□□□□□ -0.17
SPTLC1-202ENST00000337841 SIPA1L1O43166 1804 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 BTBD19C9JJ37 291 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 F5H6K3 240 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 IFIT3O14879 490 aaKnown RBP14□□□□□ -0.17
SPTLC1-202ENST00000337841 NMT2O60551 498 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 OSBPP22059 807 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 NOVP48745 357 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 KLRC3Q07444 240 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 CYB5R4Q7L1T6 521 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 DHX32Q7L7V1 743 aaKnown RBP14□□□□□ -0.17
SPTLC1-202ENST00000337841 TMTC2Q8N394 836 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 JMYQ8N9B5 988 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 ANKS1AQ92625 1134 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 C12orf42Q96LP6 360 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 PTPN18Q99952 460 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 VCPKMTQ9H867 229 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 AGTPBP1Q9UPW5 1226 aa14□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 PDHXO00330 501 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 PRC1O43663 620 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 ANAPC15P60006 121 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 MOGSQ13724 837 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 GPAT2Q6NUI2 795 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 MB21D2Q8IYB1 491 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 TMEM87BQ96K49 555 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 JAKMIP1Q96N16 626 aaKnown RBP13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 SLC45A1Q9Y2W3 748 aa13.99□□□□□ -0.17
SPTLC1-202ENST00000337841 TNKSO95271 1327 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 IGF2BP3O00425 579 aaKnown RBP eCLIP13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 CA12O43570 354 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 HOXA7P31268 230 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 WTAPQ15007 396 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 IFIT1BQ5T764 474 aaKnown RBP13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 BLOC1S2Q6QNY1 142 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 CHST3Q7LGC8 479 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 FAM43AQ8N2R8 423 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 GMCL1P1Q8NEA9 526 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 NKX2-3Q8TAU0 364 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 TM6SF1Q9BZW5 370 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 ZFYVE28Q9HCC9 887 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 RNF186Q9NXI6 227 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 PNMA3Q9UL41 463 aa13.98□□□□□ -0.17
SPTLC1-202ENST00000337841 WDR19Q8NEZ3 1342 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 WDR46O15213 610 aaKnown RBP13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 TRPA1O75762 1119 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 IRX3P78415 501 aaPredicted RBP13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 FGD1P98174 961 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 EXOSC10Q01780 885 aaKnown RBP13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 TAF1CQ15572 869 aaPredicted RBP13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 ADCK5Q3MIX3 580 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 TREML2Q5T2D2 321 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 RCSD1Q6JBY9 416 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 SPICE1Q8N0Z3 855 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 LRRC47Q8N1G4 583 aaKnown RBP13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 ENAHQ8N8S7 591 aaPredicted RBP13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 IGDCC4Q8TDY8 1250 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 BACH2Q9BYV9 841 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 HOXC10Q9NYD6 342 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
SPTLC1-202ENST00000337841 NDUFB10O96000 172 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 VCAM1P19320 739 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 SLC1A4P43007 532 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 ANTXR2P58335 489 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 DGKZQ13574 1117 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 COG2Q14746 738 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 SEC23AQ15436 765 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 SYNE3Q6ZMZ3 975 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 NFXL1Q6ZNB6 911 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 CATSPERGQ6ZRH7 1159 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 PNMA1Q8ND90 353 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 PARK7Q99497 189 aaKnown RBP13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 C22orf23Q9BZE7 217 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 TANGO6Q9C0B7 1094 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 SAGE1Q9NXZ1 904 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 ISY1Q9ULR0 285 aaKnown RBP13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
SPTLC1-202ENST00000337841 DOCK1Q14185 1865 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 CCDC69A6NI79 296 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 BMP3P12645 472 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 DSG3P32926 999 aa13.95□□□□□ -0.18
SPTLC1-202ENST00000337841 LIFRP42702 1097 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms