RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TOP1P11387 765 aaKnown RBP18.08■□□□□ 0.49
SEC13-201ENST00000337354 HMGCS2P54868 508 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 MOGSQ13724 837 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 CYB5R4Q7L1T6 521 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 DHX32Q7L7V1 743 aaKnown RBP18.08■□□□□ 0.49
SEC13-201ENST00000337354 ANKRD23Q86SG2 305 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 CLEC10AQ8IUN9 316 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 NKX2-3Q8TAU0 364 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 TMEM87BQ96K49 555 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 VCPKMTQ9H867 229 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 SLC45A1Q9Y2W3 748 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 WDR19Q8NEZ3 1342 aa18.08■□□□□ 0.48
SEC13-201ENST00000337354 HSPA8P11142 646 aaKnown RBP18.07■□□□□ 0.48
SEC13-201ENST00000337354 PABPC4Q13310 644 aaKnown RBP eCLIP18.07■□□□□ 0.482e-9■□□□□ 8.8
SEC13-201ENST00000337354 ADCK5Q3MIX3 580 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 IFNL1Q8IU54 200 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 TMTC2Q8N394 836 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 PTPN18Q99952 460 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 ZKSCAN3Q9BRR0 538 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 BACH2Q9BYV9 841 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 AGTPBP1Q9UPW5 1226 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 TNKSO95271 1327 aa18.07■□□□□ 0.48
SEC13-201ENST00000337354 F5H6K3 240 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 IFIT3O14879 490 aaKnown RBP18.06■□□□□ 0.48
SEC13-201ENST00000337354 CA12O43570 354 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 LBX1P52954 281 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 KLRC3Q07444 240 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 GADL1Q6ZQY3 521 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 ENAHQ8N8S7 591 aaPredicted RBP18.06■□□□□ 0.48
SEC13-201ENST00000337354 GMCL1P1Q8NEA9 526 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 IL17RAQ96F46 866 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 JAKMIP1Q96N16 626 aaKnown RBP18.06■□□□□ 0.48
SEC13-201ENST00000337354 TMEM47Q9BQJ4 181 aa18.06■□□□□ 0.48
SEC13-201ENST00000337354 BTBD19C9JJ37 291 aa18.05■□□□□ 0.48
SEC13-201ENST00000337354 PRC1O43663 620 aa18.05■□□□□ 0.48
SEC13-201ENST00000337354 HOXA7P31268 230 aaPredicted RBP18.05■□□□□ 0.48
SEC13-201ENST00000337354 EXOSC10Q01780 885 aaKnown RBP18.05■□□□□ 0.48
SEC13-201ENST00000337354 SEC23AQ15436 765 aa18.05■□□□□ 0.48
SEC13-201ENST00000337354 ZYXQ15942 572 aaKnown RBP18.05■□□□□ 0.48
SEC13-201ENST00000337354 IFIT1BQ5T764 474 aaKnown RBP18.05■□□□□ 0.48
SEC13-201ENST00000337354 GPAT2Q6NUI2 795 aa18.05■□□□□ 0.48
SEC13-201ENST00000337354 BLOC1S2Q6QNY1 142 aa18.05■□□□□ 0.48
SEC13-201ENST00000337354 IGDCC4Q8TDY8 1250 aa18.05■□□□□ 0.48
SEC13-201ENST00000337354 IGF2BP3O00425 579 aaKnown RBP eCLIP18.04■□□□□ 0.48
SEC13-201ENST00000337354 ANTXR2P58335 489 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 CHST3Q7LGC8 479 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 ZSWIM6Q9HCJ5 1215 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 CASP8AP2Q9UKL3 1982 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L15C9J2P7 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L13C9JLJ4 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L11C9JVI0 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L18D6R9N7 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L22D6RA61 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L17D6RBQ6 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L19D6RCP7 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L20D6RJB6 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 PDHXO00330 501 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 WDR46O15213 610 aaKnown RBP18.04■□□□□ 0.48
SEC13-201ENST00000337354 VCAM1P19320 739 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 LIFRP42702 1097 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 RBM25P49756 843 aaKnown RBP18.04■□□□□ 0.48
SEC13-201ENST00000337354 USP17L24Q0WX57 530 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 WTAPQ15007 396 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 TMEM67Q5HYA8 995 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 LRRC47Q8N1G4 583 aaKnown RBP18.04■□□□□ 0.48
SEC13-201ENST00000337354 FAM43AQ8N2R8 423 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 FBXL16Q8N461 479 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 GMCL1Q96IK5 515 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 C22orf23Q9BZE7 217 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 PNMA3Q9UL41 463 aa18.04■□□□□ 0.48
SEC13-201ENST00000337354 MYH8P13535 1937 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 TRPA1O75762 1119 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 NDUFB10O96000 172 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 CASTP20810 708 aaKnown RBP18.03■□□□□ 0.48
SEC13-201ENST00000337354 OSBPP22059 807 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 RPS6KB1P23443 525 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 TREML2Q5T2D2 321 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 SLFN13Q68D06 897 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 RUFY3Q7L099 469 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 CFHR5Q9BXR6 569 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 SAGE1Q9NXZ1 904 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 CYP46A1Q9Y6A2 500 aa18.03■□□□□ 0.48
SEC13-201ENST00000337354 RAD21O60216 631 aa18.02■□□□□ 0.47
SEC13-201ENST00000337354 DGKZQ13574 1117 aa18.02■□□□□ 0.47
SEC13-201ENST00000337354 CATSPERGQ6ZRH7 1159 aa18.02■□□□□ 0.47
SEC13-201ENST00000337354 SPICE1Q8N0Z3 855 aa18.02■□□□□ 0.47
SEC13-201ENST00000337354 PNMA1Q8ND90 353 aa18.02■□□□□ 0.47
SEC13-201ENST00000337354 RPAP3Q9H6T3 665 aaPredicted RBP18.02■□□□□ 0.47
SEC13-201ENST00000337354 RNF186Q9NXI6 227 aa18.02■□□□□ 0.47
SEC13-201ENST00000337354 HOXC10Q9NYD6 342 aa18.02■□□□□ 0.47
SEC13-201ENST00000337354 LAMA4Q16363 1823 aa18.01■□□□□ 0.47
SEC13-201ENST00000337354 PHIPQ8WWQ0 1821 aa18.01■□□□□ 0.47
SEC13-201ENST00000337354 SH2B2O14492 632 aaPredicted RBP18.01■□□□□ 0.47
SEC13-201ENST00000337354 SLC1A4P43007 532 aa18.01■□□□□ 0.47
SEC13-201ENST00000337354 KIAA1755Q5JYT7 1200 aa18.01■□□□□ 0.47
SEC13-201ENST00000337354 COL13A1Q5TAT6 717 aaPredicted RBP18.01■□□□□ 0.47
SEC13-201ENST00000337354 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms