RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 CCDC12Q8WUD4 166 aaPredicted RBP24.38■■□□□ 1.49
PTDSS1-201ENST00000337004 CPLX3Q8WVH0 158 aa24.38■■□□□ 1.49
PTDSS1-201ENST00000337004 ACSBG1Q96GR2 724 aa24.38■■□□□ 1.49
PTDSS1-201ENST00000337004 ADGRG1Q9Y653 693 aa24.38■■□□□ 1.49
PTDSS1-201ENST00000337004 COL14A1Q05707 1796 aaKnown RBP24.38■■□□□ 1.49
PTDSS1-201ENST00000337004 SF3B3Q15393 1217 aaKnown RBP24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 SMYD4Q8IYR2 804 aaPredicted RBP24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 MRPL44Q9H9J2 332 aaKnown RBP24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 KAT6BQ8WYB5 2073 aa24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 NLRP5P59047 1200 aa24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 RSRC2Q7L4I2 434 aaKnown RBP24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 CNGA4Q8IV77 575 aa24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 SRBD1Q8N5C6 995 aaKnown RBP24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 CCDC51Q96ER9 411 aa24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 FAM84BQ96KN1 310 aaPredicted RBP24.37■■□□□ 1.49
PTDSS1-201ENST00000337004 DUOX1Q9NRD9 1551 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 CNTNAP5Q8WYK1 1306 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 ORC4O43929 436 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 CLEC4GQ6UXB4 293 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 ST7Q9NRC1 585 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 MINPP1Q9UNW1 487 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 COL1A1P02452 1464 aaPredicted RBP24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 MFAP3LO75121 409 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 PLA2G4AP47712 749 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 NOM1Q5C9Z4 860 aaKnown RBP24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 TEX35Q5T0J7 233 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 RAD9BQ6WBX8 426 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 RABGGTAQ92696 567 aa24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.36■■□□□ 1.49
PTDSS1-201ENST00000337004 ITIH6Q6UXX5 1313 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 WTIPA6NIX2 430 aaPredicted RBP24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 KIF5CO60282 957 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 SCG2P13521 617 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 ERFEQ4G0M1 354 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 GOLGA1Q92805 767 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 LZTFL1Q9NQ48 299 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 E2F4Q16254 413 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 PIK3AP1Q6ZUJ8 805 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 CTNND2Q9UQB3 1225 aa24.35■■□□□ 1.49
PTDSS1-201ENST00000337004 CASP14P31944 242 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 RRAGBQ5VZM2 374 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 ZNF384Q8TF68 577 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 CRNKL1Q9BZJ0 848 aaKnown RBP24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 XDHP47989 1333 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 SPAG1Q07617 926 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 RASGRP2Q7LDG7 609 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 ANKRD20A12PQ8NF67 263 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 STAMQ92783 540 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 NSUN4Q96CB9 384 aaKnown RBP24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 RWDD2AQ9UIY3 292 aa24.34■■□□□ 1.49
PTDSS1-201ENST00000337004 LRRC10BA6NIK2 292 aa24.33■■□□□ 1.49
PTDSS1-201ENST00000337004 GTPBP6O43824 516 aaPredicted RBP24.33■■□□□ 1.49
PTDSS1-201ENST00000337004 PFKFB3Q16875 520 aaPredicted RBP24.33■■□□□ 1.49
PTDSS1-201ENST00000337004 TAF3Q5VWG9 929 aa24.33■■□□□ 1.49
PTDSS1-201ENST00000337004 LIMA1Q9UHB6 759 aaKnown RBP24.33■■□□□ 1.49
PTDSS1-201ENST00000337004 CICQ96RK0 1608 aaPredicted RBP24.33■■□□□ 1.48
PTDSS1-201ENST00000337004 MCM7P33993 719 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 CC2D1AQ6P1N0 951 aaPredicted RBP24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 FBXO33Q7Z6M2 555 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 IRX2Q9BZI1 471 aaPredicted RBP24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 EPC1Q9H2F5 836 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 BLZF1Q9H2G9 400 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 ATP8A2Q9NTI2 1148 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 RMND1Q9NWS8 449 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 N4BP3O15049 544 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 JAKMIP3Q5VZ66 844 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 PDXDC2PQ6P474 469 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 C3orf67Q6ZVT6 689 aa24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 DCP1AQ9NPI6 582 aaPredicted RBP24.32■■□□□ 1.48
PTDSS1-201ENST00000337004 NMT2O60551 498 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 SEC31AO94979 1220 aaKnown RBP24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 GYPCP04921 128 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 KIF5BP33176 963 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 MECOMQ03112 1051 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 TUBB2AQ13885 445 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 FAM47AQ5JRC9 791 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 ARL6IP4Q66PJ3 421 aaKnown RBP24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 TUBB2BQ9BVA1 445 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 PARD6BQ9BYG5 372 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 ARFGAP3Q9NP61 516 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 THRAP3Q9Y2W1 955 aaKnown RBP24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 DOT1LQ8TEK3 1739 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 CALML3P27482 149 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 PAK1Q13153 545 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 KRT31Q15323 416 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 TMTC1Q8IUR5 882 aa24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 ARPP21Q9UBL0 812 aaPredicted RBP24.31■■□□□ 1.48
PTDSS1-201ENST00000337004 FECHP22830 423 aa24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 GTF2E1P29083 439 aaPredicted RBP24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 TXLNAP40222 546 aa24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 CCT6AP40227 531 aaKnown RBP24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 TTF2Q9UNY4 1162 aaKnown RBP24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 LONP1P36776 959 aaKnown RBP24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 FXR1P51114 621 aaKnown RBP eCLIP24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 ZNF658Q5TYW1 1059 aaPredicted RBP24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
PTDSS1-201ENST00000337004 TSPY2A6NKD2 308 aa24.29■■□□□ 1.48
PTDSS1-201ENST00000337004 TRIM14Q14142 442 aa24.29■■□□□ 1.48
PTDSS1-201ENST00000337004 SRGAP1Q7Z6B7 1085 aa24.29■■□□□ 1.48
PTDSS1-201ENST00000337004 CEP112Q8N8E3 955 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms