RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
APOBEC3B-202ENST00000335760 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
APOBEC3B-202ENST00000335760 TMOD4Q9NZQ9 345 aa16.55■□□□□ 0.24
APOBEC3B-202ENST00000335760 PTPRFP10586 1907 aa16.55■□□□□ 0.24
APOBEC3B-202ENST00000335760 WDR19Q8NEZ3 1342 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 CCL15-CCL14A0A0B4J2E2 113 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 RAD21O60216 631 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 RPS6KB1P23443 525 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 USP14P54578 494 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 EXOSC10Q01780 885 aaKnown RBP16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 WTAPQ15007 396 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 SEC23AQ15436 765 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 CCL15Q16663 113 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 SH3D19Q5HYK7 790 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 IFIT1BQ5T764 474 aaKnown RBP16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 RUFY3Q7L099 469 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 IGDCC4Q8TDY8 1250 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 ANKS1AQ92625 1134 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 IL17RAQ96F46 866 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 TMEM87BQ96K49 555 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 MTA3Q9BTC8 594 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 GPHNQ9NQX3 736 aaPredicted RBP16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 EMILIN3Q9NT22 766 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 CYP46A1Q9Y6A2 500 aa16.54■□□□□ 0.24
APOBEC3B-202ENST00000335760 FASTKD5Q7L8L6 764 aaKnown RBP16.53■□□□□ 0.24
APOBEC3B-202ENST00000335760 BRI3BPQ8WY22 251 aa16.53■□□□□ 0.24
APOBEC3B-202ENST00000335760 TBC1D32Q96NH3 1257 aa16.53■□□□□ 0.24
APOBEC3B-202ENST00000335760 UPF3BQ9BZI7 483 aaKnown RBP16.53■□□□□ 0.24
APOBEC3B-202ENST00000335760 VCPKMTQ9H867 229 aa16.53■□□□□ 0.24
APOBEC3B-202ENST00000335760 KAT14Q9H8E8 782 aa16.53■□□□□ 0.24
APOBEC3B-202ENST00000335760 SYNPO2Q9UMS6 1093 aa16.53■□□□□ 0.24
APOBEC3B-202ENST00000335760 TESPA1A2RU30 521 aaPredicted RBP16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 F5H6K3 240 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 KLRC3Q07444 240 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 MOGSQ13724 837 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 KIAA1755Q5JYT7 1200 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 SPICE1Q8N0Z3 855 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 SENP2Q9HC62 589 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 MTMR7Q9Y216 660 aa16.52■□□□□ 0.24
APOBEC3B-202ENST00000335760 NDUFB10O96000 172 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 MAP2K2P36507 400 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 INHBEP58166 350 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 FGD1P98174 961 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 Q6ZUG5 572 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 PROCA1Q8NCQ7 364 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 GMCL1P1Q8NEA9 526 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 C12orf42Q96LP6 360 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 PTPN18Q99952 460 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 PDRG1Q9NUG6 133 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 LOC285556D6RIA3 1793 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 BTBD19C9JJ37 291 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 TM4SF4P48230 202 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 TREML2Q5T2D2 321 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 GPAT2Q6NUI2 795 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 LPAR1Q92633 364 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 KIF2CQ99661 725 aa16.51■□□□□ 0.23
APOBEC3B-202ENST00000335760 CCDC69A6NI79 296 aa16.5■□□□□ 0.23
APOBEC3B-202ENST00000335760 VCAM1P19320 739 aa16.5■□□□□ 0.23
APOBEC3B-202ENST00000335760 LIFRP42702 1097 aa16.5■□□□□ 0.23
APOBEC3B-202ENST00000335760 IFNL1Q8IU54 200 aa16.5■□□□□ 0.23
APOBEC3B-202ENST00000335760 DNAJC5GQ8N7S2 189 aa16.5■□□□□ 0.23
APOBEC3B-202ENST00000335760 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
APOBEC3B-202ENST00000335760 AGTPBP1Q9UPW5 1226 aa16.5■□□□□ 0.23
APOBEC3B-202ENST00000335760 THSD7BQ9C0I4 1608 aa16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 IGF2BP3O00425 579 aaKnown RBP eCLIP16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 WDR46O15213 610 aaKnown RBP16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 ANKRD23Q86SG2 305 aa16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 DCAF4Q8WV16 495 aa16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 RPAP3Q9H6T3 665 aaPredicted RBP16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L15C9J2P7 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L13C9JLJ4 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L11C9JVI0 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L18D6R9N7 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L22D6RA61 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L17D6RBQ6 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L19D6RCP7 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L20D6RJB6 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 PDHXO00330 501 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 SLC1A4P43007 532 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 NEK4P51957 841 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 USP17L24Q0WX57 530 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 FAM83BQ5T0W9 1011 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 OTUD7BQ6GQQ9 843 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 RASGRP2Q7LDG7 609 aa16.48■□□□□ 0.23
APOBEC3B-202ENST00000335760 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms